LOC120573309


Basic Information

Item Value
gene id LOC120573309
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6637883 ~ 6638815 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822975.1
ATGATCATGAAAAACTCTACACAGGTTTCATATTTCACTTTTGGAGCATACTTTAATATTGGGCTCTTTAAATACTTATTTTTCCTGATTATTATGTGTTTTTATGCTGTAATTATTTGTACCAATCTTTTGCTGATTGTGGTTATGTGTATGAACAGAAGCTTACATGAACCTATGTACCTTTTTCTGTGCAGCCTGTTTGTAAATGAACTGTATGGTAGTACAGGGTTGTTTCCATTCCTTCTGGTTCAGATCctctctgacattcacactgtttctgctccttgttgtttcctgcagatgtatTGTTTGTATACATATGCAGCTATACAATTTATTAACTTATCCATCATGTCGTATGACAGATATCTTGCTATCTGTTATCCTCTGCAATATAACACACGTATGACATACAAAAAGGTTGCCATGCTTATTGCTGTAACATGGTTAGTCCCATTGATTGGAGTTGCTGTCCCAatatttttaagttcctctttacagctgtgtgggaACATCATTAACAAAGTTTACTGTAACAACTATTATGTTGTCAAACTGGCCTGCTCTGACACAACAGGGAACAACATTTATGGACTCATTAACACTTGTCTTTTTGTCTTTGGTCCTCTCAGTTTAATTCTTTACACCTACGTGAAGATCCTTAAAGTGTGTTATTCTGGTTCTAAACAGACCAGACAGAAAGCTGTCAGTACCTGCACACCTCACCTCGCTTCTCTACTCAACTTCTCTTTTGGGGGTTTATTTGAAATAGTAGAGAGCAGGTTTGTTATGAGCAGTGTACCCATGATGTTGCGTATATTTTTGTCATTATACTTTCTGACCTGCCAACCGATCTTTAACCCTTTAATGTTTGGTTTGCAAATGACTAAAATACGTAGCCTATGTAAAACTCTTGTCTTTggtaaaatgtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822975.1 True 933 mRNA 0.36 1 6637883 6638815

Neighbor

gene id symbol gene type direction distance location
LOC120570331 NA coding upstream 2358 6634599 ~ 6635525 (+)
LOC120545416 NA coding upstream 20160 6616797 ~ 6617723 (+)
LOC120545410 NA coding upstream 24645 6612312 ~ 6613238 (+)
LOC120545404 NA coding upstream 30273 6599759 ~ 6607610 (+)
LOC120572346 NA coding upstream 47215 6589736 ~ 6590668 (+)
LOC120545443 NA coding downstream 26335 6665150 ~ 6670062 (+)
LOC120545448 NA coding downstream 60687 6699502 ~ 6709328 (+)
LOC120545475 NA coding downstream 84979 6723794 ~ 6724723 (+)
LOC120545480 NA coding downstream 90348 6729163 ~ 6734845 (+)
LOC120545496 NA coding downstream 127637 6766452 ~ 6767381 (+)
G14939 NA non-coding upstream 59430 6578222 ~ 6578453 (+)
G14930 NA non-coding upstream 125997 6511135 ~ 6511886 (+)
G14928 NA non-coding upstream 127909 6508571 ~ 6509974 (+)
G14917 NA non-coding upstream 143233 6494388 ~ 6494650 (+)
G14908 NA non-coding upstream 160737 6476674 ~ 6477146 (+)
LOC120572178 NA non-coding downstream 51216 6690031 ~ 6690891 (+)
G15012 NA non-coding downstream 305507 6944322 ~ 6991913 (+)
G15021 NA non-coding downstream 338984 6977799 ~ 6978105 (+)
G15032 NA non-coding downstream 377980 7016795 ~ 7017311 (+)
G15050 NA non-coding downstream 413371 7052186 ~ 7053965 (+)
spcs2 spcs2 other upstream 220374 6407985 ~ 6417509 (+)
rnf169 NA other upstream 233458 6393062 ~ 6404425 (+)
G14344 NA other upstream 1109264 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1220748 4801340 ~ 5417135 (+)
G14209 LOC102792843 other upstream 2110506 4500173 ~ 4527377 (+)
G15019 NA other downstream 334030 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 759286 7398101 ~ 7399141 (+)
G15234 NA other downstream 852550 7491365 ~ 7492057 (+)
rffl rffl other downstream 1167994 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 1187795 7826610 ~ 7828087 (+)

Expression


Co-expression Network