eif3k (eif3k)


Basic Information

Item Value
gene id eif3k
gene name eif3k
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13024216 ~ 13030645 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823202.1
TCTTTCCGGTCCGACCCTTTTCTCCCTCCGCTCCGGTACCTTTTCTACTCCGCGGCCCACGTGCGGATTTAATTCGGTTTTTCCCTCTAAAGTTTTCTGTAAAAGTTTGGACCAAATGTCGACGTCTTTCGAGCAGATGAGGGCGAACGTGGGTAAACTCCTGCGAGGAATCGACAGGTACAACCCAGAAAACCTTCCTACGTTGGAGCGCTACGTGGAGACACAAGCTAAAGAAAACGCCTACGACCTGGAGGCCAACCTGGCTGTCCTGAAGCTGTACCAGTTCAACCCAGCCTACTTCCAGACTCCGGTGACCTCCCAGATTCTGCTGAAGGCTCTGACCAACCTGCCACACACCGACTTCACTCTCTGCAAGTGTATGATCGACCAAACACACCAGCAAGAGGAGCGTCCCATCAGACAGATCCTCTACCTGGGGAACCTGCTGGAGACGTGCCACTTCCAGAGCTTCTggACGAGTCTTGAGGAGAACCGAGAGCTCATCGACGGCATTACTGGTTTCGAGGATTCCGTACGCAAGTTCATCTGCCACGTCGTGGGCATCACCTACCAGACCATCGAGCACCGGTTACTGGCTGAGATGCTGGGAGACCCGCTGGACACACAGGTGAAGGTGTGGATGAACAAGTACGGCTGGACGGAGAACCAGGAGGGACAAATCTTCATCTTCAACCAGGAGGAGAGCGTCAAGCCCAAGAACATCGTGGAGAAGATCGACTTTGAGAGTGTATCCAGCATCATGGCCACATCTCAgtgatgcaaacacacacacacacatatatacacatacacacacattaagcaAGACAGATTCAACCAGGTCATTTGTATTCATAATCACTCTTTTctcaataaaaataatttatcaTTTACA
>XM_039823210.1
TCTTTCCGGTCCGACCCTTTTCTCCCTCCGCTCCGGTACCTTTTCTACTCCGCGGCCCACGTGCGGATTTAATTCGGTTTTTCCCTCTAAAGTTTTCTGTAAAAGTTTGGACCAAATGTCGACGTCTTTCGAGCAGATGAGGGCGAACGTGGGTAAACTCCTGCGAGGAATCGACAGGTACAACCCAGAAAACCTTCCTACGTTGGAGCGCTACGTGGAGACACAAGCTAAAGAAAACGCCTACGACCTGGAGGCCAACCTGGCTGTCCTGAAGCTGTACCAGTTCAACCCAGCCTACTTCCAGACTCCGGTGACCTCCCAGATTCTGCTGAAGGCTCTGACCAACCTGCCACACACCGACTTCACTCTCTGCAAGTGTATGATCGACCAAACACACCAAGAGGAGCGTCCCATCAGACAGATCCTCTACCTGGGGAACCTGCTGGAGACGTGCCACTTCCAGAGCTTCTggACGAGTCTTGAGGAGAACCGAGAGCTCATCGACGGCATTACTGGTTTCGAGGATTCCGTACGCAAGTTCATCTGCCACGTCGTGGGCATCACCTACCAGACCATCGAGCACCGGTTACTGGCTGAGATGCTGGGAGACCCGCTGGACACACAGGTGAAGGTGTGGATGAACAAGTACGGCTGGACGGAGAACCAGGAGGGACAAATCTTCATCTTCAACCAGGAGGAGAGCGTCAAGCCCAAGAACATCGTGGAGAAGATCGACTTTGAGAGTGTATCCAGCATCATGGCCACATCTCAgtgatgcaaacacacacacacacatatatacacatacacacacattaagcaAGACAGATTCAACCAGGTCATTTGTATTCATAATCACTCTTTTctcaataaaaataatttatcaTTTACA

Function

symbol description
eif3k Predicted to enable ribosome binding activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within regulation of translational initiation and translation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of eukaryotic translation initiation factor 3 complex. Orthologous to human EIF3K (eukaryotic translation initiation factor 3 subunit K).

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit K isoform X1

GO:

id name namespace
GO:0001731 formation of translation preinitiation complex biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0005852 eukaryotic translation initiation factor 3 complex cellular_component
GO:0005634 nucleus cellular_component
GO:0033290 eukaryotic 48S preinitiation complex cellular_component
GO:0016282 eukaryotic 43S preinitiation complex cellular_component
GO:0043022 ribosome binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K15028 EIF3K; translation initiation factor 3 subunit K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823202.1 True 895 mRNA 0.51 8 13024216 13030645
XM_039823210.1 False 892 mRNA 0.51 8 13024216 13030645

Neighbor

gene id symbol gene type direction distance location
zgc:85932 LOC102780342 coding downstream 2354 12989797 ~ 13021862 (-)
trnak-uuu_5 NA coding downstream 19927 13004217 ~ 13004289 (-)
trnak-uuu_3 NA coding downstream 25177 12998967 ~ 12999039 (-)
actn4 actn4,LOC106956878 coding downstream 40697 12911498 ~ 12983519 (-)
LOC120548705 NA coding downstream 116255 12876587 ~ 12907961 (-)
zgc:152863 LOC103368334,LOC104955327 coding upstream 115017 13145662 ~ 13161958 (-)
pak4 LOC103368331 coding upstream 139738 13170383 ~ 13210526 (-)
klc3 LOC104964758,LOC103368325 coding upstream 388306 13418951 ~ 13446001 (-)
mark4b mark4,LOC107094871,LOC103373878 coding upstream 434367 13465012 ~ 13530107 (-)
LOC120547238 LOC102785257,LOC103373880,LOC104952507,LOC105417105 coding upstream 511097 13541742 ~ 13555869 (-)
G16678 NA non-coding downstream 113043 12868881 ~ 12911173 (-)
G16676 NA non-coding downstream 201294 12822429 ~ 12822922 (-)
G16554 NA non-coding downstream 447633 12576233 ~ 12576583 (-)
G16531 NA non-coding downstream 580207 12443629 ~ 12444009 (-)
G16528 NA non-coding downstream 608303 12413484 ~ 12415913 (-)
G16706 LOC101165163 non-coding upstream 93074 13123719 ~ 13125662 (-)
G16709 NA non-coding upstream 134172 13164817 ~ 13165594 (-)
G16716 NA non-coding upstream 223698 13254343 ~ 13255880 (-)
G16737 NA non-coding upstream 287418 13318063 ~ 13360219 (-)
G16751 NA non-coding upstream 365565 13396210 ~ 13398320 (-)
slc8a2b LOC102291167 other downstream 168489 12664199 ~ 12855727 (-)
srsf7a srsf7,LOC103358184 other downstream 362026 12654605 ~ 12662190 (-)
LOC120544465 islr2 other downstream 394124 12625965 ~ 12630092 (-)
LOC120554539 NA other downstream 481761 12542265 ~ 12542455 (-)
LOC120554398 NA other downstream 482833 12541220 ~ 12541383 (-)
ccdc9 ccdc9 other upstream 194269 13224914 ~ 13261849 (-)
sae1 sae1 other upstream 282798 13313443 ~ 13335153 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other upstream 632262 13662907 ~ 13762368 (-)
G16871 blvrb other upstream 670998 13701643 ~ 13708040 (-)
G16880 NA other upstream 725304 13755949 ~ 13823057 (-)

Expression


Co-expression Network