zgc:152863 (LOC103368334,LOC104955327)


Basic Information

Item Value
gene id zgc:152863
gene name LOC103368334,LOC104955327
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13145662 ~ 13161958 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823248.1
tgtgtgtgagagagagagagagataaaaaagAGAGCGTTTCCAGAATGTGACGGAGCCACGCAGGTGGGCGGTTCTTGGCGGCTCACAGCGGCCAATCGGAGGCCTGGCTGTACGGTGTCGAGCACAGCTGATCGATGAGTCAGGGGGCGAGAGCAGCCGAAAAGGTCCCACTTGTTGCTGAGCAGGAGCGGCGACAGGAGCTTCAGCTGACGGacggacggagagagagagagagagagagagagagagagagagagagggagggagacataTCGATCCATCTTCGCCTCACGTCCTCCAATCTGCCGGTATACACAAGCAGGCGCTCCGCTGCAGAGCTCCACGGCCGCTTCAGTGCTCACGTACCCCGCGCTGCTGCCTCATCCGCGGCTCTCAGGAAGTCTGGTTTGATGTCTGCGTCAGTCGTGAATGCATCGCTGTGTGGACGCGTCAGTCTGGTCTGTGGACTCCTCCTCCTGGCCTTTTCACCGCTCCTCACGGCAGGCCGACTGAGTAACTGCAGTCACCCTCTGGTGCCAGAACATGGAGGTTTCCGATGTGACCCGTCCCCGTGTCGAGGTTTCCCCCACAAGAGCGCCATCCACGTCTTCTGTGAGCCGGGATATCACCTCAGCAGCAAGCTCCGTGTCTCCCGGTGCCGCCACGGGAAGTGGCAGCCTGCCATACCTGCCTGCGTCCCCATCAGAGaAGGTCCAAACCTGAACTCTGACAACAGAGTGAACGACTCGATGCCCAGCATGGCCACAACCGCGGTGGGCGTGTCCATCTTCCTGCTCACCACCACTGCATGCCTGGTCATCAAGTCCCGCCTCTACCCCTGTCGATCACGCAGcagCCGTCGCTCTTCCGACCAGCTGGACCTGATGGTGGACGGACTTCCTGTCTCCCTGCCCTCCTACGAGGAGGCGGTGTACGGCAGCTGGGGGCAGCGCCTGCCCACCTGCTCGGCGCCGGGGCCCACCCAGCTCCTATTGGCTCAGGAGGCTCCCGACGGTCACCCGGCGTCTCTCAACAACCAACCGGACGGCAGTCGCCGCCCCCTCCTGTCCAGCCCCGACAACCCCCCGCCCCCTTACGAGGAGGTCCAGTCGTCCCACCCCAGAGACAGGACGGGGGACGCGGACAAGGACGCTTGACTGACGGGACAGGAAGGGGGTTCGATTGACAGCTGCAGCGTTTACTCTGCAGATGGTGAAACGAAAACCCAGACTGACAGCGGACTTCTGCACTTTCCCTGGTTGGCTCGCCGGCATCGGGACATTCAGTCCAATCAATCACATGCTAGTTTGGACGAAGCCGAtgagctctgattggccagatgTTAGATCACAAAGACCTGATTGAAGAGGATATTTCTACATGAAACGTTGATTGTAAAGTGCGTTGTGTGAATGTAAGTGACAATGTAAGTGAGAAGGGAGTTTACGTGCTGTCTGGTGAAAACCTTTTATAACCCGAATGCCTTTTGGTTAGtgataaatatatatttcattgTTTAAACAATAAGATATATTAAGTTTAAAACTAAAAATCATCACACAAGCTAGAATAATGAGGTTTTCACAGtcgtataaaagtaaaagtgtgtgcgtgtgtgttttcagtgttgctCTGGAGACGTCGTCCATCCTTTCCCGTCAGTGACGGGGCCGATCGCGCTGTTGCAGAAACCTTGTGTGTTTCCAAGGCAACAAACTATATTCCACTTGTGTCTGATTCTACCTTTTGTGCAGCGTTTCTTTCAGCGGTGTTGATTTAAAGCCAGCGTGGTGGAAAAAAGTATTCAGATTTTCACAGCAATGCGtcatattctataagatcatcattatgtttgtagcgtcgctgtcctgtgagaaccacgtagGCTATCtctaaaaagtcttaaaacttttcatggtgtcagaaaaacagccctgtttttttttttgctttgtgaCGACGCATTTTaccagctgatccaagaggaTTTTGAAAGACTTTATTTAGATTAAGGAGGAGGAGAACTTTCTCAACACATTAAGGAagacttcatccttcagtttatcacaaacattcatcatcaacacatctggagatacgtgGTTTTCACTGAACAGGAAGGGGAGGGTCATTTGAAAAGTAACttaagctgtcagacaaatttAGTGAGGTAAAATCTACAATATTTACCTCCTGAGATGTTGTGGAAAAGAATAAAGCTGCAATAAATTCtgcaagtaaagtacaagtacctcaaattggttacattccaccactggtgcgCAGTAACCTTGGTAACAGGCGACAAAAAACAGCATGTCGTGATGTCGATTTTTGTGTGCAGCGGATTATATTTAAAGACTTGAAAATGCTCAGAAAGCACACGGTGTTTCAGAGGGTTTCTCAGTGGTAAATGACacgaaaaataataatatttggaTGAATTTGAATGTACAGTGAAAAGAATCTGAAATAATGTGTACATTTATTTGCCCTGGTGGCATCGGTGCAGACACACAGAGGTGCTTTTaaacctgcaaaaaaaaaaaaaaggaaaaaaagcccACAGATGTTGGACCAAAAAAAAGTGAACTAAACAAACGGTGTCCTCACTTCAGCTGGCCGGTTCCCTCTCTTGATGCCTTCACAGACCTTGAATGTAATTTATGTTTCATTTTGTGGCAACAAATCTTGACTATTAATATGGAATTGTAATATTTACAGGAAGATTATTTGTACATTGTATTATTGCACaagattatatgataaataaatgttgaggtGTTTGATATAa
>XM_039823256.1
tgtgtgtgagagagagagagagataaaaaagAGAGCGTTTCCAGAATGTGACGGAGCCACGCAGGTGGGCGGTTCTTGGCGGCTCACAGCGGCCAATCGGAGGCCTGGCTGTACGGTGTCGAGCACAGCTGATCGATGAGTCAGGGGGCGAGAGCAGCCGAAAAGGTCCCACTTGTTGCTGAGCAGGAGCGGCGACAGGAGCTTCAGCTGACGGacggacggagagagagagagagagagagagagagagagagagagagggagggagacataTCGATCCATCTTCGCCTCACGTCCTCCAATCTGCCGGTATACACAAGCAGGCGCTCCGCTGCAGAGCTCCACGGCCGCTTCAGTGCTCACGTACCCCGCGCTGCTGCCTCATCCGCGGCTCTCAGGAAGTCTGGTTTGATGTCTGCGTCAGTCGTGAATGCATCGCTGTGTGGACGCGTCAGTCTGGTCTGTGGACTCCTCCTCCTGGCCTTTTCACCGCTCCTCACGGCAGGCCGACTGAGTAACTGCAGTCACCCTCTGGTGCCAGAACATGGAGGTTTCCGATGTGACCCGTCCCCGTGTCGAGGTTTCCCCCACAAGAGCGCCATCCACGTCTTCTGTGAGCCGGGATATCACCTCAGCAGCAAGCTCCGTGTCTCCCGGTGCCGCCACGGGAAGTGGCAGCCTGCCATACCTGCCTGCGTCCCCATCAGAGaAGGTCCAAACCTGAACTCTGACAACAGAGTGAACGACTCGATGCCCAGCATGGCCACAACCGCGGTGGGCGTGTCCATCTTCCTGCTCACCACCACTGCATGCCTGGTCATCAAGTCCCGCCTCTACCCCTGTCGATCACGCAGCCGTCGCTCTTCCGACCAGCTGGACCTGATGGTGGACGGACTTCCTGTCTCCCTGCCCTCCTACGAGGAGGCGGTGTACGGCAGCTGGGGGCAGCGCCTGCCCACCTGCTCGGCGCCGGGGCCCACCCAGCTCCTATTGGCTCAGGAGGCTCCCGACGGTCACCCGGCGTCTCTCAACAACCAACCGGACGGCAGTCGCCGCCCCCTCCTGTCCAGCCCCGACAACCCCCCGCCCCCTTACGAGGAGGTCCAGTCGTCCCACCCCAGAGACAGGACGGGGGACGCGGACAAGGACGCTTGACTGACGGGACAGGAAGGGGGTTCGATTGACAGCTGCAGCGTTTACTCTGCAGATGGTGAAACGAAAACCCAGACTGACAGCGGACTTCTGCACTTTCCCTGGTTGGCTCGCCGGCATCGGGACATTCAGTCCAATCAATCACATGCTAGTTTGGACGAAGCCGAtgagctctgattggccagatgTTAGATCACAAAGACCTGATTGAAGAGGATATTTCTACATGAAACGTTGATTGTAAAGTGCGTTGTGTGAATGTAAGTGACAATGTAAGTGAGAAGGGAGTTTACGTGCTGTCTGGTGAAAACCTTTTATAACCCGAATGCCTTTTGGTTAGtgataaatatatatttcattgTTTAAACAATAAGATATATTAAGTTTAAAACTAAAAATCATCACACAAGCTAGAATAATGAGGTTTTCACAGtcgtataaaagtaaaagtgtgtgcgtgtgtgttttcagtgttgctCTGGAGACGTCGTCCATCCTTTCCCGTCAGTGACGGGGCCGATCGCGCTGTTGCAGAAACCTTGTGTGTTTCCAAGGCAACAAACTATATTCCACTTGTGTCTGATTCTACCTTTTGTGCAGCGTTTCTTTCAGCGGTGTTGATTTAAAGCCAGCGTGGTGGAAAAAAGTATTCAGATTTTCACAGCAATGCGtcatattctataagatcatcattatgtttgtagcgtcgctgtcctgtgagaaccacgtagGCTATCtctaaaaagtcttaaaacttttcatggtgtcagaaaaacagccctgtttttttttttgctttgtgaCGACGCATTTTaccagctgatccaagaggaTTTTGAAAGACTTTATTTAGATTAAGGAGGAGGAGAACTTTCTCAACACATTAAGGAagacttcatccttcagtttatcacaaacattcatcatcaacacatctggagatacgtgGTTTTCACTGAACAGGAAGGGGAGGGTCATTTGAAAAGTAACttaagctgtcagacaaatttAGTGAGGTAAAATCTACAATATTTACCTCCTGAGATGTTGTGGAAAAGAATAAAGCTGCAATAAATTCtgcaagtaaagtacaagtacctcaaattggttacattccaccactggtgcgCAGTAACCTTGGTAACAGGCGACAAAAAACAGCATGTCGTGATGTCGATTTTTGTGTGCAGCGGATTATATTTAAAGACTTGAAAATGCTCAGAAAGCACACGGTGTTTCAGAGGGTTTCTCAGTGGTAAATGACacgaaaaataataatatttggaTGAATTTGAATGTACAGTGAAAAGAATCTGAAATAATGTGTACATTTATTTGCCCTGGTGGCATCGGTGCAGACACACAGAGGTGCTTTTaaacctgcaaaaaaaaaaaaaaggaaaaaaagcccACAGATGTTGGACCAAAAAAAAGTGAACTAAACAAACGGTGTCCTCACTTCAGCTGGCCGGTTCCCTCTCTTGATGCCTTCACAGACCTTGAATGTAATTTATGTTTCATTTTGTGGCAACAAATCTTGACTATTAATATGGAATTGTAATATTTACAGGAAGATTATTTGTACATTGTATTATTGCACaagattatatgataaataaatgttgaggtGTTTGATATAa

Function

NR:

description
PREDICTED: sushi domain-containing protein 6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823248.1 True 2795 mRNA 0.49 5 13145662 13161958
XM_039823256.1 False 2792 mRNA 0.49 5 13145662 13161958

Neighbor

gene id symbol gene type direction distance location
eif3k eif3k coding downstream 115017 13024216 ~ 13030645 (-)
zgc:85932 LOC102780342 coding downstream 123800 12989797 ~ 13021862 (-)
trnak-uuu_5 NA coding downstream 141373 13004217 ~ 13004289 (-)
trnak-uuu_3 NA coding downstream 146623 12998967 ~ 12999039 (-)
actn4 actn4,LOC106956878 coding downstream 162143 12911498 ~ 12983519 (-)
pak4 LOC103368331 coding upstream 8425 13170383 ~ 13210526 (-)
klc3 LOC104964758,LOC103368325 coding upstream 256993 13418951 ~ 13446001 (-)
mark4b mark4,LOC107094871,LOC103373878 coding upstream 303054 13465012 ~ 13530107 (-)
LOC120547238 LOC102785257,LOC103373880,LOC104952507,LOC105417105 coding upstream 379784 13541742 ~ 13555869 (-)
LOC120547251 NA coding upstream 394322 13556280 ~ 13567554 (-)
G16688 NA non-coding downstream 8594 13015625 ~ 13137068 (-)
G16706 LOC101165163 non-coding downstream 20000 13123719 ~ 13125662 (-)
G16678 NA non-coding downstream 234489 12868881 ~ 12911173 (-)
G16676 NA non-coding downstream 322740 12822429 ~ 12822922 (-)
G16554 NA non-coding downstream 569079 12576233 ~ 12576583 (-)
G16709 NA non-coding upstream 2859 13164817 ~ 13165594 (-)
G16716 NA non-coding upstream 92385 13254343 ~ 13255880 (-)
G16737 NA non-coding upstream 156105 13318063 ~ 13360219 (-)
G16751 NA non-coding upstream 234252 13396210 ~ 13398320 (-)
G16882 NA non-coding upstream 605941 13767899 ~ 13770080 (-)
slc8a2b LOC102291167 other downstream 289935 12664199 ~ 12855727 (-)
srsf7a srsf7,LOC103358184 other downstream 483472 12654605 ~ 12662190 (-)
LOC120544465 islr2 other downstream 515570 12625965 ~ 12630092 (-)
LOC120554539 NA other downstream 603207 12542265 ~ 12542455 (-)
LOC120554398 NA other downstream 604279 12541220 ~ 12541383 (-)
ccdc9 ccdc9 other upstream 62956 13224914 ~ 13261849 (-)
sae1 sae1 other upstream 151485 13313443 ~ 13335153 (-)
si:ch211-14c7.2 LOC103364094,LOC102787713,LOC101474093,LOC102298349,LOC106947863,LOC103138296,LOC106921473 other upstream 500949 13662907 ~ 13762368 (-)
G16871 blvrb other upstream 539685 13701643 ~ 13708040 (-)
G16880 NA other upstream 593991 13755949 ~ 13823057 (-)

Expression


Co-expression Network