LOC120573852 (LOC101479958)


Basic Information

Item Value
gene id LOC120573852
gene name LOC101479958
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 21417316 ~ 21435893 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823724.1
CTTTCGCTATCCTATGAAAACAAAACCGGCATACTGCAGCTGTGCGCAGTGGTTGTCTAGACCATTCCAGTTTTGTAACGTTTAACGTTAAAGTTGACGCTATATATCTGCAGGTGGAAACTAACTGGACAGAATCATTCTCTTCAAAGGTTCAAAGATGAAGTGCTGTGGTCTGCTAACTGCACAGAAGGAACCAGTTCCTCTGAAGAGCGTGGAGGTGGAGCTGGAGGTGAGGGCCCATGTGGCTACAGTGGTCTCCACTCTGAACTATGAGAACAAGGAGGACAAACCACTGGAGGCTGTTTTTGTCTTCCCTCTGCCTGGAGATGCTGCTGTCTGTCACTTCAGTGCTAagattggacagacagagaTTGTAGCTGAGGTGAAGGAGAAACAGAAGGCTCGTGAGGAGTATGATGACGCTTTGAGCTCCGGTCAGCAGGCCTTCCTGTTGGAGGAGAGTGATCAGAGTCCAGATATATTCTCTCTGAGTGTGGGCAGTCTGCGTCCAGGAGAGAGCGCCTCCATCAGGCTGGAGTACGTCACTGAGCTGGCTGTGCAGGCTGATGAAGGGCTGAGGTTTTGTCTGCCTGCTGTGCTCAACCCTCGCTACCAACCTCAGGGAAGTGAAGATGTTTGTATCCAGGTGACCTCTGTTCCAGCCTCTCTGGTGCCCTacagtctgtctttctctgctcgaGTGTCCTCTCCTCGTCCAGTCTCTAAAGTAGAGTCCAACTGTGCCCTGGACGCTCTCCAGTACCTCAACACAGAGCAAACCCAGGCTACGGTCAAGTTGGCTGCAGGACACAAGTTTGACAGAGATGTTGAACTGCTGATTTATTACAAAGATGCCCACCAGCCCACTGCTGTGGTGGAGGTAGGACAGGCCTCTGCTAAGCCTGGCTCTCTGATGGGTGATCCAGTGGTGATGCTGAGCCTGTACCCTGAGTTCCCCCAGGCTGTGATGTCTTCAGTCGCCTCATGTGGAGAGTTTGTGTTATTACTGGATCGATCTGGCAGTATGGATGGGTCCCGTATAAAGAGTGCCAGGGAAACTCTGCTGCTCCTGTTGAAGAGCTTACCCATAGGCTGCTATTTCAACATCTACAGTTTTGGGTCCTGCCATGAACACATCTTCTCTGAGAGTGTGGAGTACAGCCAGAAGACCATGGAAGAAGCTCTGAAGAAAATTGAGGAGATGGGCGCTGATCTGGGAGGAACAGAGATCCTTGAGCCCCTCAAACACATTTACAGCCAGCCCTGCATTCCCAGTCAACCTAGAcaaCTATTTGTCTTTACTGATGGAGAGGTGGGGAATACCAAAGAAgtgataaatctggtgaagaAGAATTCAGGATCCCACAGGTGTTTCTCTTTTGGGATTGGGGAAGGGGCCAGCTCTGCTCTTATCAACGGGTTGGCCAAGGAAGGAGGAGGTCACGCTCAGTTCATCACAGGGACTGACAGGATGCAACCCAAAGTGATGCAGTCGCTGCGTTTTGCTCTGCACCCAGCTGTGGTGGACATCTCAGTCAAGTGGGATTTGCCAAAGGGAGTGTCTGTTACTTGTCtctctccaccaatcacagcacttttccagggtcaaaggtcactggTTTATGCCCAGCTCACTGGAAAGAGTTCAGCAGCGGAGGGCTGTGTGACGGTGAAGTACAGCCTGGCAGGTCATCCCACTCAGAACCAGCTGCACTTCAGTCTCAAACCTGCAGAGGACACTGGAATAACAGTCCACAGGTTGGGTGCTCGGAGTCTGATTCGCTCTCTGGAGATGGAGGAGAGCGAATTGCGCAGAGGAGAGCGGGATGAAGAAGTGAAGAAGAAGCTGGTGGAGCTCAGTGTCCAATCAGGAGTGAGCAGTGCCTTCACTGCCTTCATTGCTGTCAACAAAGGAGATGGCGAGGCGATTCAAGGACCTCTGGTGGTCAGAAATGTTCCAACACCCTGGCTGACGGGTGGTTGCGGTTCGCTGCGGTCACTCACAATGATGCAAGGCCCAATGGTTTTTGGTGCAATGCAATCCAACATGAGAATGACAAGAAGTGCATGTGCCTCAGTTGCAAAGCAGAGGATGATGTGTGACAGTCTCCCCATGTTTCAATGTGAGAGTATAAGCATTGAGCACAAGCAGCCACCCAGAGACCCTTTGCTGCAGCTGGTCTCCCTCCAGAAGGCGTCTGGCTGCTGGGTGCTGGATCCAGCTCTGGCTGCTGCACTGGGAAAGACCAGCAGggaggtggaaaagcccaagcCTGCATTGGTGAACCAGGAAGTATGGGCCACCATTCTGGCTCTGATCTGGCTTCATGGTTTCAAGATGGATGCTCAGGAAGAGTGGGAGCTTCTGGCTATGAAGGCGGTGTCATGGCTCCGTGCCCAGAATGcCCGACGTGTGACAGAGTGTGTGAAAGCTGGAAATGCTCTGTTGGGTTGCCACATGCAGAAAGACGCCCTGGGACTCTAAGATTTTCATTAAAGTGGCTTCTCTTTAGGATTGGTACAACGAAGCAGATTATCTCCATCCTACAAGCTTTACATTATAAACATTGCGTGTTTGCACAGCAGGAATGAATTGATttgaaaaatactttgcacTATTTTACGTGAAAAAGAAGAAGCCATATTTAATTTGCAAGATAGGCCTTACATCTATCCATTGTCAGTCATGTAACAACAAGTTCTTTTGCTTGAAACCTTAATGTCAAGTTCTATATAAAACAGTTTTACTTGTGAAAATAAAACCTGATGAAGGATATTTGAATGAAGAAA
>XM_039823732.1
GGGTACCGATTaccgatccaataccaGTTCAAAGATGAAGTGCTGTGGTCTGCTAACTGCACAGAAGGAACCAGTTCCTCTGAAGAGCGTGGAGGTGGAGCTGGAGGTGAGGGCCCATGTGGCTACAGTGGTCTCCACTCTGAACTATGAGAACAAGGAGGACAAACCACTGGAGGCTGTTTTTGTCTTCCCTCTGCCTGGAGATGCTGCTGTCTGTCACTTCAGTGCTAagattggacagacagagaTTGTAGCTGAGGTGAAGGAGAAACAGAAGGCTCGTGAGGAGTATGATGACGCTTTGAGCTCCGGTCAGCAGGCCTTCCTGTTGGAGGAGAGTGATCAGAGTCCAGATATATTCTCTCTGAGTGTGGGCAGTCTGCGTCCAGGAGAGAGCGCCTCCATCAGGCTGGAGTACGTCACTGAGCTGGCTGTGCAGGCTGATGAAGGGCTGAGGTTTTGTCTGCCTGCTGTGCTCAACCCTCGCTACCAACCTCAGGGAAGTGAAGATGTTTGTATCCAGGTGACCTCTGTTCCAGCCTCTCTGGTGCCCTacagtctgtctttctctgctcgaGTGTCCTCTCCTCGTCCAGTCTCTAAAGTAGAGTCCAACTGTGCCCTGGACGCTCTCCAGTACCTCAACACAGAGCAAACCCAGGCTACGGTCAAGTTGGCTGCAGGACACAAGTTTGACAGAGATGTTGAACTGCTGATTTATTACAAAGATGCCCACCAGCCCACTGCTGTGGTGGAGGTAGGACAGGCCTCTGCTAAGCCTGGCTCTCTGATGGGTGATCCAGTGGTGATGCTGAGCCTGTACCCTGAGTTCCCCCAGGCTGTGATGTCTTCAGTCGCCTCATGTGGAGAGTTTGTGTTATTACTGGATCGATCTGGCAGTATGGATGGGTCCCGTATAAAGAGTGCCAGGGAAACTCTGCTGCTCCTGTTGAAGAGCTTACCCATAGGCTGCTATTTCAACATCTACAGTTTTGGGTCCTGCCATGAACACATCTTCTCTGAGAGTGTGGAGTACAGCCAGAAGACCATGGAAGAAGCTCTGAAGAAAATTGAGGAGATGGGCGCTGATCTGGGAGGAACAGAGATCCTTGAGCCCCTCAAACACATTTACAGCCAGCCCTGCATTCCCAGTCAACCTAGAcaaCTATTTGTCTTTACTGATGGAGAGGTGGGGAATACCAAAGAAgtgataaatctggtgaagaAGAATTCAGGATCCCACAGGTGTTTCTCTTTTGGGATTGGGGAAGGGGCCAGCTCTGCTCTTATCAACGGGTTGGCCAAGGAAGGAGGAGGTCACGCTCAGTTCATCACAGGGACTGACAGGATGCAACCCAAAGTGATGCAGTCGCTGCGTTTTGCTCTGCACCCAGCTGTGGTGGACATCTCAGTCAAGTGGGATTTGCCAAAGGGAGTGTCTGTTACTTGTCtctctccaccaatcacagcacttttccagggtcaaaggtcactggTTTATGCCCAGCTCACTGGAAAGAGTTCAGCAGCGGAGGGCTGTGTGACGGTGAAGTACAGCCTGGCAGGTCATCCCACTCAGAACCAGCTGCACTTCAGTCTCAAACCTGCAGAGGACACTGGAATAACAGTCCACAGGTTGGGTGCTCGGAGTCTGATTCGCTCTCTGGAGATGGAGGAGAGCGAATTGCGCAGAGGAGAGCGGGATGAAGAAGTGAAGAAGAAGCTGGTGGAGCTCAGTGTCCAATCAGGAGTGAGCAGTGCCTTCACTGCCTTCATTGCTGTCAACAAAGGAGATGGCGAGGCGATTCAAGGACCTCTGGTGGTCAGAAATGTTCCAACACCCTGGCTGACGGGTGGTTGCGGTTCGCTGCGGTCACTCACAATGATGCAAGGCCCAATGGTTTTTGGTGCAATGCAATCCAACATGAGAATGACAAGAAGTGCATGTGCCTCAGTTGCAAAGCAGAGGATGATGTGTGACAGTCTCCCCATGTTTCAATGTGAGAGTATAAGCATTGAGCACAAGCAGCCACCCAGAGACCCTTTGCTGCAGCTGGTCTCCCTCCAGAAGGCGTCTGGCTGCTGGGTGCTGGATCCAGCTCTGGCTGCTGCACTGGGAAAGACCAGCAGggaggtggaaaagcccaagcCTGCATTGGTGAACCAGGAAGTATGGGCCACCATTCTGGCTCTGATCTGGCTTCATGGTTTCAAGATGGATGCTCAGGAAGAGTGGGAGCTTCTGGCTATGAAGGCGGTGTCATGGCTCCGTGCCCAGAATGcCCGACGTGTGACAGAGTGTGTGAAAGCTGGAAATGCTCTGTTGGGTTGCCACATGCAGAAAGACGCCCTGGGACTCTAAGATTTTCATTAAAGTGGCTTCTCTTTAGGATTGGTACAACGAAGCAGATTATCTCCATCCTACAAGCTTTACATTATAAACATTGCGTGTTTGCACAGCAGGAATGAATTGATttgaaaaatactttgcacTATTTTACGTGAAAAAGAAGAAGCCATATTTAATTTGCAAGATAGGCCTTACATCTATCCATTGTCAGTCATGTAACAACAAGTTCTTTTGCTTGAAACCTTAATGTCAAGTTCTATATAAAACAGTTTTACTTGTGAAAATAAAACCTGATGAAGGATATTTGAATGAAGAAA
>XM_039823742.1
CTTTCGCTATCCTATGAAAACAAAACCGGCATACTGCAGCTGTGCGCAGTGGTTGTCTAGACCATTCCAGTTTTGTAACGTTTAACGTTAAAGTTGACGCTATATATCTGCAGGTGGAAACTAACTGGACAGAATCATTCTCTTCAAAGGTTCAAAGATGAAGTGCTGTGGTCTGCTAACTGCACAGAAGGAACCAGTTCCTCTGAAGAGCGTGGAGGTGGAGCTGGAGGTGAGGGCCCATGTGGCTACAGTGGTCTCCACTCTGAACTATGAGAACAAGGAGGACAAACCACTGGAGGCTGTTTTTGTCTTCCCTCTGCCTGGAGATGCTGCTGTCTGTCACTTCAGTGCTAagattggacagacagagaTTGTAGCTGAGGTGAAGGAGAAACAGAAGGCTCGTGAGGAGTATGATGACGCTTTGAGCTCCGGTCAGCAGGCCTTCCTGTTGGAGGAGAGTGATCAGAGTCCAGATATATTCTCTCTGAGTGTGGGCAGTCTGCGTCCAGGAGAGAGCGCCTCCATCAGGCTGGAGTACGTCACTGAGCTGGCTGTGCAGGCTGATGAAGGGCTGAGGTTTTGTCTGCCTGCTGTGCTCAACCCTCGCTACCAACCTCAGGGAAGTGAAGATGTTTGTATCCAGGTGACCTCTGTTCCAGCCTCTCTGGTGCCCTacagtctgtctttctctgctcgaGTGTCCTCTCCTCGTCCAGTCTCTAAAGTAGAGTCCAACTGTGCCCTGGACGCTCTCCAGTACCTCAACACAGAGCAAACCCAGGCTACGGTCAAGTTGGCTGCAGGACACAAGTTTGACAGAGATGTTGAACTGCTGATTTATTACAAAGATGCCCACCAGCCCACTGCTGTGGTGGAGGTAGGACAGGCCTCTGCTAAGCCTGGCTCTCTGATGGGTGATCCAGTGGTGATGCTGAGCCTGTACCCTGAGTTCCCCCAGGCTGTGATGTCTTCAGTCGCCTCATGTGGAGAGTTTGTGTTATTACTGGATCGATCTGGCAGTATGGATGGGTCCCGTATAAAGAGTGCCAGGGAAACTCTGCTGCTCCTGTTGAAGAGCTTACCCATAGGCTGCTATTTCAACATCTACAGTTTTGGGTCCTGCCATGAACACATCTTCTCTGAGAGTGTGGAGTACAGCCAGAAGACCATGGAAGAAGCTCTGAAGAAAATTGAGGAGATGGGCGCTGATCTGGGAGGAACAGAGATCCTTGAGCCCCTCAAACACATTTACAGCCAGCCCTGCATTCCCAGTCAACCTAGAcaaCTATTTGTCTTTACTGATGGAGAGGTGGGGAATACCAAAGAAgtgataaatctggtgaagaAGAATTCAGGATCCCACAGGTGTTTCTCTTTTGGGATTGGGGAAGGGGCCAGCTCTGCTCTTATCAACGGGTTGGCCAAGGAAGGAGGAGGTCACGCTCAGTTCATCACAGGGACTGACAGGATGCAACCCAAAGTGATGCAGTCGCTGCGTTTTGCTCTGCACCCAGCTGTGGTGGACATCTCAGTCAAGTGGGATTTGCCAAAGGGAGTGTCTGTTACTTGTCtctctccaccaatcacagcacttttccagggtcaaaggtcactggTTTATGCCCAGCTCACTGGAAAGAGTTCAGCAGCGGAGGGCTGTGTGACGGTGAAGTACAGCCTGGCAGGTCATCCCACTCAGAACCAGCTGCACTTCAGTCTCAAACCTGCAGAGGACACTGGAATAACAGTCCACAGGTTGGGTGCTCGGAGTCTGATTCGCTCTCTGGAGATGGAGGAGAGCGAATTGCGCAGAGGAGAGCGGGATGAAGAAGTGAAGAAGAAGCTGGTGGAGCTCAGTGTCCAATCAGGAGTGAGCAGTGCCTTCACTGCCTTCATTGCTGTCAACAAAGGAGATGGCGAGGCGATTCAAGGACCTCTGGTGGTCAGAAATGTTCCAACACCCTGGCTGACGGGTGGTTGCGGTTCGCTGCGGTCACTCACAATGATGCAAGGTAAGAAACAAGGCAAAGCTACTTTCAACACACATCTGAATACTTCTATTTATCTCAGTATTAACACTGAAAATGCATTAACATGTTTACTAGCTTTACATGTGAACAATTCTCTGTCGTCCATGTAGTTGCTGATGGCCATATTGTTAAGCGAATGACATGGATTGTAGTTGCTTTCTAAAAATAACTTCAGTCTAAATTTAAGCTGAGCTCAGACTACAGGAGTATCGAGCCGATTTAGCCCCAATTCACCCCTCTTGACAATCTGCCAAGAAATCTGGTCCGGGACCTTGGCCGGTACAGATGCTCAGCCTAGATTATTTGGTAATTTAAGCGGTGTACAGATCTTATGTTTAACCTCCCGACCTATTCGCGGTCGCATAAGGGCCACccagatatttttaaacatgtttgatatgTAGTTCAAATCTTATGATTATATGATTATGATTAAGTCATTACTTTCACAATAGCCAATGAGCTGATATTGTTGCCAAGCAATTGTAAACAGGAGACGGAAATGGTTAAATCCTCACATCCCTTTCTTTCTGAAGAAAAGACAACCCGTGTTTTATCCACGTTTGTTTtgccttctccttttttttgtcattgcaAAGGATTATTCCAGCAAATTGTCATCCAGACGTCACCCCACGTCAGTCCTCATAAGATCACGTGGTAATATTCACTTGACTGCGCAGCTTTTTCAGAAAATGTCTACACTGCTGCATTCAACAAACTTTGCATTTGGGGAGCACAATTTGATTCTgcttgtgaaaaacaaaatcaagtGAATTAGTTTGAAGTTTCCAGAACCGTCCACTGACTTTTTCTATTCTTGCCAATTTTCTGTATTGTTATGTGATTTGTTCATCTCTTGTTTTGACCTGTTTGGTCCTCAACATGTGTTGAAGGTATATAGATACGTGTTGCTTCTGGTAATCTGATTTGAATGACATTTTTAAGATGGGCcccatttcagaaagcaggtttagtgaaaactctcagtttgttaaccctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823724.1 False 2790 mRNA 0.50 20 21417316 21435893
XM_039823732.1 False 2667 mRNA 0.50 20 21417316 21434367
XM_039823742.1 True 3037 mRNA 0.47 15 21422088 21435893

Neighbor

gene id symbol gene type direction distance location
rap1gap2a rap1gap2,LOC102786908 coding downstream 11788 21295349 ~ 21405528 (-)
blmh blmh coding downstream 127022 21267704 ~ 21290294 (-)
ssh2a ssh2,ssh2a coding downstream 189909 21195388 ~ 21227407 (-)
git1 git1,LOC102788862 coding downstream 265933 21121864 ~ 21151383 (-)
LOC120573880 NA coding downstream 308552 21097940 ~ 21108764 (-)
LOC120573817 LOC101479958 coding upstream 7450 21443343 ~ 21462495 (-)
LOC120573866 LOC101481218,LOC101479958 coding upstream 54633 21490526 ~ 21502253 (-)
LOC120551403 LOC102783338 coding upstream 71161 21507054 ~ 21514704 (-)
LOC120573840 LOC101479958 coding upstream 81020 21516913 ~ 21528761 (-)
si:ch211-132b12.7 NA coding upstream 129658 21565551 ~ 21572680 (-)
G18492 NA non-coding downstream 6117 21410908 ~ 21411199 (-)
G18429 NA non-coding downstream 301322 21113372 ~ 21115994 (-)
LOC120575525 NA non-coding downstream 330441 21085093 ~ 21086875 (-)
G18391 NA non-coding downstream 480067 20936993 ~ 20937249 (-)
G18385 NA non-coding downstream 529287 20887806 ~ 20888029 (-)
G18591 NA non-coding upstream 91562 21527455 ~ 21583403 (-)
LOC120572042 NA non-coding upstream 94104 21529997 ~ 21532755 (-)
G18626 NA non-coding upstream 197087 21632980 ~ 21695722 (-)
G18631 samsn1,LOC102311369,LOC107374247 non-coding upstream 215810 21651703 ~ 21652866 (-)
G18669 NA non-coding upstream 384096 21819989 ~ 21878764 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 155393 21237188 ~ 21261923 (-)
si:ch1073-340i21.1 NA other downstream 320115 21094177 ~ 21097201 (-)
LOC120547993 NA other downstream 1275778 20137072 ~ 20141538 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 1607186 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 1700009 19701227 ~ 19717307 (-)
LOC120572205 NA other upstream 174921 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 228183 21664076 ~ 21710363 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other upstream 547409 21983302 ~ 22007175 (-)
G18885 gramd1b other upstream 1703320 23139213 ~ 23148515 (-)
G18948 LOC103474743 other upstream 1810710 23246603 ~ 23252420 (-)

Expression


Co-expression Network