LOC120574562


Basic Information

Item Value
gene id LOC120574562
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 44094848 ~ 44098473 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824969.1
CCTGCTTTCATTCAAGGGACATTCTGTCAGACAGGCAACAACATAATATCCTATAACTATTTAACTTTTAATACATCTTGGAACGACACAGCTAACGGATTACGGAGATTATCTGTGTGAAGTCATTGCTCCAAAGACACAGCAACCAGCCAGAAGACTGAAGAAAACAATGACCATTGATTTTGTAAGCTTAATTTACATATGGCTGCTGCCACTGACAGCAAGCAGCGCAGTGACATCTGGCCAGAATAATGACTTCACTATTGTGATGATTGGACCGCAGGTAGCAAGAAATAAATTCACTCACGACCAGCTGACGACACAGGAGGCATCCAGCTTAAATCCACTCTTAGATGTCTCAGGTCGTAAAATCGACCTGTCTATCACAGTTGATGTAAATCTAACAgaggaaaaagctacaaaactCAGCACTAAACCTTTACTGCAAACAGTTCAACAATTCAAAACACCTTCAAAGACAGTTTTACCAGGTATTTCAACAGCAGCAACTCCAACAAATGAAGGAAGCATGAAGTCCACGACAGAAATACAATTTAAAGTCACAACATCAGCAACGACGGTTGTAACCAGTCACAGCAGCATCTCAACCACAACTACAAGGGTACCGTCAATACTAAGCAGTTCGACCCAAAACCAGTTAACCAGTGATAAAACTTCACATCCACCTAAACGTCCAACACAGTCTGCAAACCTCATCTCTACTACAACCACATCTACCAAGCCTGTTGAAAACAAATCTACAAATACAAGCCCAGTCACAGTTGGGGATGCTACGCAGTCCGTACGTTTATACAAAATGACAATTGCCACAACAAAGACACCATTCAGCCACATCACAAAGGCAAAGGAAAGACAAGATGCTccagaaaaaaatgcaaagtCCAATAAGGAAAAACACCACAGTAAAGCAGTGGCAGGGCTAATAGGTGGAGCCCTGATATTAATGATGGTAGGATTCCTGATCATCTATATAAAGAAACAGATGCTTCAAAGGCAGCAAATAACAACTAGAGACTGGGCCGGTCCTTCACCATTTCTTGAGGGTGGCGCTGACAATGGCCAGGTAACACTGAGGTCATCTAATCAGATTTCTCTTTCCAGCTTCCTGCCTCATAGACTGTCCAAAAGGTTGTCCTTGCTCCCAGAAACAAATGAGAAGTTAGAAGATATGACACAAGGTACTACATTTGGCGATAAACATCAAGGGAGTACATTTGGTCAAGAGGTAGATGGAAATGATGTACAAGAAAGCTATGGGACTGCTGTAGTTGTTTCAGAAATAAAAAGCACAGAAGATGTTCCAGAGACTGTTGAAAACTCTGTCTTAGCGACCTCTTCACAAACAGAAGAGGACCCGCTATACACATACAACAATTTGGAGGTTGCAAACCACAGTCAAGACCATTCTGCAAATCCCCCCCCTTTATCTGGAGCTGTGGAAAATTCTCTGGCACAACTGAATGAGGGCTTTGGGCAACCATAAGTCAACTTAAGCCCCAAACCCTCCCCCAACGCATTCACTTTCCTGGTTTCTAGGCAGCAACAACTGTGACTGACAGGAAACTACAGGGATTCTCACACcctgctgtattttctttatcACCATGTGGAAATGTCACCCAAACCTGAAGAGTGTGAATCTAAAATGCTTCATTTTCCAACATCTCTGCCCTGCCCAACCTCTGCAAAGTGCTCCTAGAGAAAATATAACAATAAGGCGCATGCAGGCACCTTTGTATTCATCTTGCAGGTGATGGAAAGGTTATGCGGTGGTGAGAACAAACCGTAACTAAGTAACAGGAATCAGGAATTGTCCTGATTAGCTATGACTGATAGCTGTAAATACCACAGGCTAAATGCAAACACTTGCATTGTCTACATCTGCTTAGAAAAACGGGCCGACTCATGTTTCATCTGAAATAGAAGTTAGGGTCAGTCTACTTGAGTGCAAATATTTGTTGTCTCATTAAATTACTATCTGCAGAGTAATGTAGCATGTACAGTTGAAAAGAAAGAAGGGTCAGTACCCTCGGCACTGGGGTTACACGcttttgtattttatatagcAGGTTTCaaaactagggttgggcatcgagaaccgattcctaatcggaatcgtttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824969.1 True 2143 mRNA 0.42 2 44094848 44098473

Neighbor

gene id symbol gene type direction distance location
omgb omg coding downstream 7597 44083085 ~ 44087251 (-)
LOC120570616 LOC104946633,LOC103355253,LOC102792009,LOC102302768,LOC102198488 coding downstream 516437 43566580 ~ 43578411 (-)
LOC120553532 NA coding downstream 711635 43381126 ~ 43383213 (-)
efhd1 efhd1,LOC100691052,LOC101463816,LOC102780618,LOC103377704 coding downstream 1031603 42992791 ~ 43063245 (-)
LOC120549271 NA coding downstream 1184111 42904813 ~ 42910737 (-)
LOC120574575 NA coding upstream 490 44098963 ~ 44114071 (-)
LOC120551889 NA coding upstream 639388 44737861 ~ 44739433 (-)
trnah-gug NA coding upstream 812354 44910827 ~ 44910898 (-)
trnar-acg_1 NA coding upstream 813383 44911856 ~ 44911928 (-)
trnah-gug_1 NA coding upstream 813682 44912155 ~ 44912226 (-)
G23759 NA non-coding downstream 271433 43823067 ~ 43823415 (-)
LOC120549487 NA non-coding downstream 290960 43801220 ~ 43803888 (-)
G23730 NA non-coding downstream 381271 43713342 ~ 43713577 (-)
G23728 NA non-coding downstream 383740 43710552 ~ 43711108 (-)
G23706 NA non-coding downstream 424573 43669946 ~ 43670275 (-)
G23799 NA non-coding upstream 38899 44137372 ~ 44137752 (-)
G23811 NA non-coding upstream 123739 44222212 ~ 44226539 (-)
G23906 NA non-coding upstream 675732 44774205 ~ 44774439 (-)
G23912 NA non-coding upstream 707325 44805798 ~ 44806039 (-)
G23911 NA non-coding upstream 713680 44812153 ~ 44816376 (-)
smco4 NA other downstream 305413 43770066 ~ 43789435 (-)
LOC120553425 NA other downstream 378107 43700971 ~ 43716741 (-)
LOC120574039 nlk,nlk2 other downstream 748175 43236682 ~ 43346673 (-)
cntn5 NA other downstream 1927811 42029673 ~ 42167037 (-)
cadm2b cadm2,LOC100695412,LOC103378151,LOC106520568,LOC102793287 other downstream 3624672 40290005 ~ 40470176 (-)
mrps23 mrps23 other upstream 718155 44816628 ~ 44824993 (-)
bet1l bet1l other upstream 3036381 47134854 ~ 47142596 (-)
dhx34 dhx34,LOC102778731 other upstream 3197081 47295554 ~ 47325453 (-)
nectin1b nectin1,LOC102782356 other upstream 4058880 48157353 ~ 48398620 (-)

Expression


Co-expression Network