sidt2 (sidt2)


Basic Information

Item Value
gene id sidt2
gene name sidt2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 20059933 ~ 20078143 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825628.1
TCACAGATTTCTCACACTATAAACACGCTCAATCGCTTCACCCTCTGCACGAGATATAGCTACTTGCATAATGCCGCGGCACTGCGAATACACGCCGTGACAACCGATCACGTTGGACagactggaaaaaaaacacttggtgctgttttgtttttgacacTGCCCGCGTAGCTGGAGCCGAACTCCTATATCAAAACATGGAGCTGCCTTAGCAGCGTTGACCAACAATGCTAACGTTATAGCGCAGCTAGCTTGCCAGGTTTTCAGATGAAGAGGAATTGAGTATCGTTGTCTTGAAACTTTTTGTCTCGACACTTGTGTTATTTGTTGCATAACCTTATCTAGCTGGCAGCTTCTAATGTGTTGCGGATGTCAATACGACGAGGAGCAAATATTTAGCTAATGTAAACACCTCGCTGTCTCTTTAGCTTGTCAGTTAGCAGCTGTTGTTATTGTTGGTTGTTGCTGGAAGGGGCACAGCTAAGCTAGCCATCTTACGAGTAATTGTTGCTGAATGGGGGTGGAGTTGTCGCAAAGGCTAGAATAACGTTAGGTATCCGTTACATTTTAGGAAGACGGTGTCAGACAAAATGGTGTTAAGGAGTTGCTGGAAGTCTCGACATAAAAACAGCTCTGGACCTGCTCCATGTTGGACCCGACCACGATTGGCAGCCCTGCTCTGGCTCTGTGTGACCCAGTTTGTTTGCGGCAGCGGGGCGGAGGGGGAAACCAACACTGTGATCCAGAAAGATGCAGAGTTTGATGTCACCTATAATGATACAGTTACAAGTGAAAACCAGACCATCTATGCTTTCAATCACACCGTCTCCAGGAATAAGACGGAGGGAgtgcgtgtgtttgtggatGTGTTATCACAGGGTTTTGAGAGTCCCATCCTGTTTGTGGTACGACAGAAGCAAGCTGTGGTGTCTTTTCAAGTCCCTCTCATTTTAAGAGGCCTCTACCAGAGGAAGTACCCTTACAGTCATGTGGGCCGGACATTGTGCCAGCCCCCAACCCGGGCTGCCTCTGAGACCCAGTACTTTTTTGTGGACGTGTCTACCCTGTCCAGCCTGGGTACAAACTACCAGCTCAGGGTCAGCCGTGTTGAAAGCTTCACCCTGCAGACAGACAAGAAATTCAGCTTCACCGCGTCACCATCCCAACCTCAGTACTTCAAGTATGTCTTTCCTGATGGGGTGGACACTGTGATCGTCAAGGTCAACTCAGAAATGACCTTTCCCTGCTCTGTTATGTCCATCCAGGACATCCAGtGTCCTGTCTATGATCTTGACAACAATGTGGCCTTCATTGGGATGTACCAGACTATGACCAAAAAAGGCGCAATCACTGTGCAGAGAAAAGATTTTCCCAGCAACAGTTTCTATGTGGTGGTAGTGGTAAAAACCGAGGACGAGGCGTGCGGCGGTCCGCTGCGCTTCTACCCTCTCCGTCCTGATGAGCTGATCGACGCCGGCAACCGCAGCAAGTTCATTGATGTGATTGTCACCCCTGCTATCAACTCGGCGGTGTATGTGAGGGGCATGCTGTTCTGTCTGGGTATCTTCCTCTCCTTCTATCTGCTCACCTTGCTCATGACCTGTCTGGAGAACAAGCGAATGAAGAAGAGAGAGGTGTTTCAGATTGCCCCTGACATGTCGCCTGCTGAGACAGCCTCTCTGCTTGGGAAGAACGGAGATGGCAAAACTCCAGCCTCGCCATATGAATATGGTTCCTTTGCTGACAACGGCAGCACACTCAGTTCAGAGGCCATAACTGACAGCGCCACATCAACTGACAACAACTATGGATACGTGGAGCAATCGTTGGACAGTATTGGACGAAGCAGGCAGGAGTCTCTGAGCTCTGTGGAGGAGGATGACTATGACACGCTGGACGACATCAACTCAGACAAAAACATTGTCCGCACCAAGAAATTTCTATGTGTGTCTGACCTGTCCCGCAAAGACAAGAGGATCCTCAGCAAGAAATACCAAATCTACTTCTGGAACATTGCTACTATTGCTGTGTTCTATGCGCTGCCAGTTGTCCAGCTGGTCATCACCTACCAGACGGTGGTCAATGTTACAGGAAACCAGGACATCTGCTTCTACAACTTCCTGTGTGCCCACCCTCTGGGAGCTCTAAGTGCGTTCAACAACATCCTGAGTAACCTCGGTTACGTGCTGCTGggactcctcttcctccttatTGTCCTCAAAAGAGATATCGTCCACAATCGAGCCCTGGTCCGCAACGATCTCAACGCGCTGGAATGTGGTATCCCAAAGCACTTTGGTCTGTATTATGCCATGGGAACTGCTCTAATGATGGAGGGCTTGCTCAGTGCCTGCTACCACGTCTGTCCAAACTACACCAACTTCCAGTTTGACACCTCCTTCATGTACATGATTGCTGGACTGTGTATGTTGAAGTTGTATCAGAAGAGACACCCAGACATCAATGCAAGTGCTTACACTGCCTACGCCTGCCTGGCTGGGGTCATCTTCTTTTCTGTGCTGGGAGTGGTATTTGGGAAAGGAAACACAGTCTTCTGGATAATTTTCTCGGTGATCCACATTTTGTCCACTATGCTCCTCAGCACACAGCTCTACTACATGGGCCGATGGAGGCTGGACTCCGGGATCCTGCGCAGGATTGTGTACGTCATCTACACAGATTGCATCAGGCAGTGCAGTGGACCTATGTACATTGACCGTATGGTTCTGCTCGTAATGGGGAACATAGTCAACTGGTCTCTAGCTGCCTATGGCCTCATAGAGAGAcccaatgactttgcctcctacCTTTTGGCCATCGCTATCTGCAACCTGCTGCTCTACTTTGCCTTTTATATCATTATGAAGGTtgCTGGAGGCGGTGAGAGAATCCAGTGTCTGGCGTTGGTGTGTATTCTGTTCACAGCCGTGGTGTGGGGCTTTGCACTGTATTTCTTCTTCCAGGGTCTCAGCACCTGGCAGAAAACTCCAGCAGAGTCTCGAGAGCACAACAGGGACTGTATCCTGCTTTCATTCTTTGATGACCATGACATTTGGCACTTCCTCTCCTCCATTGCCATGTTTGGATCCTTCCTGGTCCTCCTGACCATGGATGACGACCTCGACACCGTCCAGAGAGACAAGATATTGGCCTTCTAGATATGACAGATCTTCTGTGATGAGCTCAGCTCTTCTTCTCTGCCTTATCGCCCTCGTCTCTCTCCATTTGCATCTCCTTCGTGTTCTAAAAAAAGCACAGCCAGTAGCCTGTTCCCCTCCTCCAGGCTGTACAGTGGGCACCTCTCTGCCTGCCACAGCCAGTCAGCCAGTAAGGGAAGGGCAGTAGCCCCTCCCTCCACCTGTATGGACACAAATGTGCCAATGAAGAACCTGGGTCGACGTCGAGTGATGCTGAAGTGTTTTGTCCTCTCGCTGCCATCATCAATATAACTGTTGTAATCGATGTTTACTTCCTGCTGACGATGAAGATAACAACATACACTCTTACTATCTAAGAAACTATCCAAATTAACTTATTTTATACTGTCTGCATTACATTTGACCGCAAAGTCAGCAATGCATTTAGCAAATTACTGTTtctatgctgtgtgtgtttgtacaggtGTGCGTGTGTTTACAAACATAAATGTGAGAATATGAATTCTGTCCAGTCTGTCAGTGGCCTTTAATGTTCTAATCATGTTACATACTGTGCTGATTGGTCAGGCCCTCGAGCTAGCTGTCCTTCTTTTGGagaatattattaataataataataataataataatgatgattgtATTTACTTCTTGACTGTCCTAAAGTCTGAATGCAAAGGTATTTTTTTGCACTGTACTGTATGACAAGAAATTGATTTTAATGTCAAACATTGCAATGAGCGGTTACTGAATAAAGGTATCATTTTCAGATA
>XM_039825636.1
GTCACAGATTTCTCACACTATAAACACGCTCAATCGCTTCACCCTCTGCACGAGATATAGCTACTTGCATAATGCCGCGGCACTGCGAATACACGCCGTGACAACCGATCACGTTGGACagactggaaaaaaaacacttggtgctgttttgtttttgacacTGCCCGCGTAGCTGGAGCCGAACTCCTATATCAAAACATGGAGCTGCCTTAGCAGCGTTGACCAACAATGCTAACGTTATAGCGCAGCTAGCTTGCCAGGTTTTCAGATGAAGAGGAATTGAGTATCGTTGTCTTGAAACTTTTTGTCTCGACACTTGTGTTATTTGTTGCATAACCTTATCTAGCTGGCAGCTTCTAATGTGTTGCGGATGTCAATACGACGAGGAGCAAATATTTAGCTAATGTAAACACCTCGCTGTCTCTTTAGCTTGTCAGTTAGCAGCTGTTGTTATTGTTGGTTGTTGCTGGAAGGGGCACAGCTAAGCTAGCCATCTTACGAGTAATTGTTGCTGAATGGGGGTGGAGTTGTCGCAAAGGCTAGAATAACGTTAGGTATCCGTTACATTTTAGGAAGACGGTGTCAGACAAAATGGTGTTAAGGAGTTGCTGGAAGTCTCGACATAAAAACAGCTCTGGACCTGCTCCATGTTGGACCCGACCACGATTGGCAGCCCTGCTCTGGCTCTGTGTGACCCAGTTTGTTTGCGGCAGCGGGGCGGAGGGGGAAACCAACACTGTGATCCAGAAAGATGCAGAGTTTGATGTCACCTATAATGATACAGTTACAAGTGAAAACCAGACCATCTATGCTTTCAATCACACCGTCTCCAGGAATAAGACGGAGGGAgtgcgtgtgtttgtggatGTGTTATCACAGGGTTTTGAGAGTCCCATCCTGTTTGTGGTACGACAGAAGCAAGCTGTGGTGTCTTTTCAAGTCCCTCTCATTTTAAGAGGCCTCTACCAGAGGAAGTACCCTTACAGTCATGTGGGCCGGACATTGTGCCAGCCCCCAACCCGGGCTGCCTCTGAGACCCAGTACTTTTTTGTGGACGTGTCTACCCTGTCCAGCCTGGGTACAAACTACCAGCTCAGGGTCAGCCGTGTTGAAAGCTTCACCCTGCAGACAGACAAGAAATTCAGCTTCACCGCGTCACCATCCCAACCTCAGTACTTCAAGTATGTCTTTCCTGATGGGGTGGACACTGTGATCGTCAAGGTCAACTCAGAAATGACCTTTCCCTGCTCTGTTATGTCCATCCAGGACATCCAGtGTCCTGTCTATGATCTTGACAACAATGTGGCCTTCATTGGGATGTACCAGACTATGACCAAAAAAGGCGCAATCACTGTGCAGAGAAAAGATTTTCCCAGCAACAGTTTCTATGTGGTGGTAGTGGTAAAAACCGAGGACGAGGCGTGCGGCGGTCCGCTGCGCTTCTACCCTCTCCGTCCTGATGAGCTGATCGACGCCGGCAACCGCAGCAAGTTCATTGATGTGATTGTCACCCCTGCTATCAACTCGGCGGTGTATGTGAGGGGCATGCTGTTCTGTCTGGGTATCTTCCTCTCCTTCTATCTGCTCACCTTGCTCATGACCTGTCTGGAGAACAAGCGAATGAAGAAGAGAGAGGTGTTTCAGATTGCCCCTGACATGTCGCCTGCTGAGACAGCCTCTCTGCTTGGGAAGAACGGAGATGGCAAAACTCCAGCCTCGCCATATGAATATGGTTCCTTTGCTGACAACGGCAGCACACTCAGTTCAGAGGCCATAACTGACAGCGCCACATCAACTGACAACAACTATGGATACGTGGGGCGGGAGCCTTTCAAACGTCGCCCAATCCTCAATCACCTTCACCACATAGCCATCCGCATTGAGCAATCGTTGGACAGTATTGGACGAAGCAGGCAGGAGTCTCTGAGCTCTGTGGAGGAGGATGACTATGACACGCTGGACGACATCAACTCAGACAAAAACATTGTCCGCACCAAGAAATTTCTATGTGTGTCTGACCTGTCCCGCAAAGACAAGAGGATCCTCAGCAAGAAATACCAAATCTACTTCTGGAACATTGCTACTATTGCTGTGTTCTATGCGCTGCCAGTTGTCCAGCTGGTCATCACCTACCAGACGGTGGTCAATGTTACAGGAAACCAGGACATCTGCTTCTACAACTTCCTGTGTGCCCACCCTCTGGGAGCTCTAAGTGCGTTCAACAACATCCTGAGTAACCTCGGTTACGTGCTGCTGggactcctcttcctccttatTGTCCTCAAAAGAGATATCGTCCACAATCGAGCCCTGGTCCGCAACGATCTCAACGCGCTGGAATGTGGTATCCCAAAGCACTTTGGTCTGTATTATGCCATGGGAACTGCTCTAATGATGGAGGGCTTGCTCAGTGCCTGCTACCACGTCTGTCCAAACTACACCAACTTCCAGTTTGACACCTCCTTCATGTACATGATTGCTGGACTGTGTATGTTGAAGTTGTATCAGAAGAGACACCCAGACATCAATGCAAGTGCTTACACTGCCTACGCCTGCCTGGCTGGGGTCATCTTCTTTTCTGTGCTGGGAGTGGTATTTGGGAAAGGAAACACAGTCTTCTGGATAATTTTCTCGGTGATCCACATTTTGTCCACTATGCTCCTCAGCACACAGCTCTACTACATGGGCCGATGGAGGCTGGACTCCGGGATCCTGCGCAGGATTGTGTACGTCATCTACACAGATTGCATCAGGCAGTGCAGTGGACCTATGTACATTGACCGTATGGTTCTGCTCGTAATGGGGAACATAGTCAACTGGTCTCTAGCTGCCTATGGCCTCATAGAGAGAcccaatgactttgcctcctacCTTTTGGCCATCGCTATCTGCAACCTGCTGCTCTACTTTGCCTTTTATATCATTATGAAGGTtgCTGGAGGCGGTGAGAGAATCCAGTGTCTGGCGTTGGTGTGTATTCTGTTCACAGCCGTGGTGTGGGGCTTTGCACTGTATTTCTTCTTCCAGGGTCTCAGCACCTGGCAGAAAACTCCAGCAGAGTCTCGAGAGCACAACAGGGACTGTATCCTGCTTTCATTCTTTGATGACCATGACATTTGGCACTTCCTCTCCTCCATTGCCATGTTTGGATCCTTCCTGGTCCTCCTGACCATGGATGACGACCTCGACACCGTCCAGAGAGACAAGATATTGGCCTTCTAGATATGACAGATCTTCTGTGATGAGCTCAGCTCTTCTTCTCTGCCTTATCGCCCTCGTCTCTCTCCATTTGCATCTCCTTCGTGTTCTAAAAAAAGCACAGCCAGTAGCCTGTTCCCCTCCTCCAGGCTGTACAGTGGGCACCTCTCTGCCTGCCACAGCCAGTCAGCCAGTAAGGGAAGGGCAGTAGCCCCTCCCTCCACCTGTATGGACACAAATGTGCCAATGAAGAACCTGGGTCGACGTCGAGTGATGCTGAAGTGTTTTGTCCTCTCGCTGCCATCATCAATATAACTGTTGTAATCGATGTTTACTTCCTGCTGACGATGAAGATAACAACATACACTCTTACTATCTAAGAAACTATCCAAATTAACTTATTTTATACTGTCTGCATTACATTTGACCGCAAAGTCAGCAATGCATTTAGCAAATTACTGTTtctatgctgtgtgtgtttgtacaggtGTGCGTGTGTTTACAAACATAAATGTGAGAATATGAATTCTGTCCAGTCTGTCAGTGGCCTTTAATGTTCTAATCATGTTACATACTGTGCTGATTGGTCAGGCCCTCGAGCTAGCTGTCCTTCTTTTGGagaatattattaataataataataataataataatgatgattgtATTTACTTCTTGACTGTCCTAAAGTCTGAATGCAAAGGTATTTTTTTGCACTGTACTGTATGACAAGAAATTGATTTTAATGTCAAACATTGCAATGAGCGGTTACTGAATAAAGGTATCATTTTCAGATA

Function

symbol description
sidt2 Predicted to enable RNA transmembrane transporter activity and double-stranded RNA binding activity. Predicted to be involved in RNA transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in lysosome and plasma membrane. Is expressed in anterior axial hypoblast; hatching gland; mesoderm; polster; and yolk syncytial layer. Orthologous to human SIDT2 (SID1 transmembrane family member 2).

NR:

description
PREDICTED: SID1 transmembrane family member 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825628.1 False 3928 mRNA 0.48 26 20059933 20078142
XM_039825636.1 True 3992 mRNA 0.48 27 20059933 20078143

Neighbor

gene id symbol gene type direction distance location
LOC120550021 NA coding downstream 29145 20028341 ~ 20030788 (-)
LOC120550005 tbx10,LOC104965412 coding downstream 32136 20023847 ~ 20027797 (-)
bace1 bace1,LOC102782465 coding downstream 36578 20011130 ~ 20023355 (-)
pcsk7 pcsk7 coding downstream 50752 19990719 ~ 20009181 (-)
nudt8 LOC107720444 coding downstream 106123 19949218 ~ 19953810 (-)
LOC120574226 lsamp,LOC106534328 coding upstream 147688 20225831 ~ 20948979 (-)
igsf11 igsf11,LOC102790613 coding upstream 885697 20963840 ~ 21080775 (-)
LOC120573880 NA coding upstream 1019797 21097940 ~ 21108764 (-)
git1 git1,LOC102788862 coding upstream 1043721 21121864 ~ 21151383 (-)
ssh2a ssh2,ssh2a coding upstream 1117245 21195388 ~ 21227407 (-)
G18329 cep164 non-coding downstream 5799 20053220 ~ 20054134 (-)
G18216 NA non-coding downstream 203623 19851904 ~ 19856310 (-)
LOC120548779 coq8b,LOC103364879,LOC107395920,LOC108247334 non-coding downstream 303940 19754887 ~ 19755993 (-)
G18184 NA non-coding downstream 410281 19649216 ~ 19649652 (-)
G18179 NA non-coding downstream 431293 19625403 ~ 19628640 (-)
G18337 NA non-coding upstream 38142 20116285 ~ 20119606 (-)
G18366 NA non-coding upstream 106668 20184811 ~ 20258055 (-)
G18367 gap43 non-coding upstream 114737 20192880 ~ 20205688 (-)
G18381 NA non-coding upstream 628378 20706521 ~ 20706785 (-)
G18382 NA non-coding upstream 695492 20773635 ~ 20773922 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 249803 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 342626 19701227 ~ 19717307 (-)
LOC120545639 eif4g1 other downstream 1837040 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1907965 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 2169272 17799999 ~ 17890661 (-)
LOC120547993 NA other upstream 58929 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1016034 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 1159045 21237188 ~ 21261923 (-)
LOC120572205 NA other upstream 1532671 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 1585933 21664076 ~ 21710363 (-)

Expression


Co-expression Network