LOC120575197


Basic Information

Item Value
gene id LOC120575197
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19872479 ~ 19891955 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825868.1
tctttttctctggAATTTTTCTTTGGAATAGTCcctcctgtcctctctctcctttataCTCTTTCATCTCATTAGAAAGTTCTGTTGTGCTGAAAACTTCTGTGCCTTGATTGAATTATCTGACCAGGAGACCAAACTAACTTTCAGGTTAAGTCTCTCCATCCAACCTTCAGATCATCCATCCTTCTCACCATGTCCACCAAAACCACCCAGTCCTTCCCCGATGGGGCCTACATGTCCCTGATGAGAGGcttgagagagctggacctccGGGGCCCCTGTGTTCCCAGTGAACTGGTGCTAATGGACTATGCCTTTCCTTTAGCAATGAACAGCCGAGGCCAGGTCCTGATGGCAGCCTCTCTGTACGGCCGTGGAAGGATCGTGGTTCTGGGTCATGAGGGCTACCTGACCGCGTTTCCTGCTCTGGTAGAGAACGCTCTGACCTGGCTGAGAGGAGATGGATCTGACAACCTGTCTGTGGGGATCCACAAAAACATCAAGGCAGTTGCTGATAAAATCAGCAAATCCAGCTTCCAAGCCAAAGTTGTGGGGGCCTTCAGTGGCAATCTGGGGTTGGGGGTGTATGTGACAGATGCCTACAGCGTGGGCGCTCACGTGAAGGACCTGGTGGCATTTCTGAAAGCTGGAGGAGGAGTGCTGATAGCGGGGCAGGCGTGGAACTGGGCTGCAAATCACCCTAAGGAGAACACGCTGCTTCAGTTTGAGGGGAATAAGGTTTCTGGTGTGGCAGGGATCTACTTCTCTAAACGTTATGGGAAGGTAGagtgcctgcctgtctgccctCAGATCCCATCTTCATGGATGGCTTTATGTGTTGGTCAGGAGTTTGAGGAGGACTTGGCGTTCTTACTCCAGGGGGTTTCAGAGTTTGACCTCCGTGATACATCTGCTTCTGAGCTTCTGGTCCACGGCCCACTAGCCTTCTCCATTGGTACCACTGAGGATCGAGGGGTGTTCCTGGGAGGATCCTACTATGGGCAGGGACGAGTCATTGTGATTACACATGAAGGACTTCTGAAAACAAAGACGCTGGCATCGTTTTGGAAGAATGCCATTAATTGGTTGGACCAAGGCCGGAAGGGGGTTGTTGGTGTTGTACCAGAGCTCAAACTTCCCAGCGAGTCAGGGTTAAAGTATGAGGAGACGGAGTTCAGGAAAGACCTGAGTGTATTTGTTTGTACAGTTTACAAGGATGACCATATGGAAGAAATCCAAAACTTTGTCGCAGAGGGAGGAGGTCTGCTGATTGGCGGACACGCATGGCATTGGTCATACACAAATGTTGGGCAAAACCAAATGATAGATTTCTCAGGAAACAAGATCCTGAACAAAATGGGTTTAAGCGTGTTggtgacaataaatgaaaaaggATCCTACAAGCCTAGCCAGGCCAAGAAAGACACCAACCACTTCCGCCATCTTCTACGTCGCTTTGCTGCTCATGTTACCCAGGGCGAAGAATTTACAAAGCATGACGGGGAACAACTAAATATACTGACCATGAACTTCTTGAACATGAAGGCTTATGACAGCTACTCCTACACACAGGTGCTGTCCATCCTCACTGATGTGTTGAAGAAGTCCGGCATGCCACAGGTGAGTGAGAAGAACCCTGTTAAGAGTCCAAAAGACCGCCTACTCCTCAGTTTAGGGGCAGCGGTATATAACACTTGCCCAGATCCTGATGCCCTCCTGCCCTTCCTCATCAAGGATATCCCCTCAATGCCAGTTGTTAAAAACCAAAGGATCAGGATTAATACGAACACAGCAGGAGAGATGGAGTGGATCAGTACAGGTCTGTACCTTTCTCCTGGTATGAAGACCGAGATAATCATACCAGCAAACATCGTCAACAAGAGCTGGATGATCCAGATAGGTTGTCAAACAGACATACTGAAGGCTGACGAGTTGAAGAGAGCACCAAGTGTTTGTGAGCGATTTCCTGTGACCACAGAGAAGATGCAGGTGTCAAACCTGTGGGGGGGACTCATCTACCTGGTGGCTCCACCCAACACAAAGGTGCAGGGGGCAGAGGTCATAGTGCAGATGGCAGTGCTTGCTCCTTATTACAAGTCTGGTGTGACAACAGCTGCTGATTGGTCGATGCTACGCACAGCTCCCTCACCCTGGGCAGAGTTGGAGTTTGACAACGTCAACCTTACTGTACCATCAGATGTTGTTCGAGACCTGGAGCGCATTGATGTGGTGGCAGCGCTTTGGAATGACATCATGAAGGGCATTGCAGATTTGGCTGCCATACCACACAAATTTGCCCGCAAAGAACGCTTTGTAGCAGATGTGCAGATTTCTGCTGGTTTCATGCATTCAGGCTATCCAATCATGATCCACACAGAATCAGCAAATGAGCTGGTCAGACCAGGTGATGCCAGAACCAAAGGCCTGTGGGGAGAAATTCATGAACTGGGACACAACCAACAAAGAACCTGCTGGGAGTTCCGACCACACACCACAGAGTGTACATGTAACCTGTGGTCAGTGTATGTTCATGAAGAGGTGCTGGGGCTCAACAGGGAAAAGGCTCATCCATCTATGACCTTAACAGAGCGCAAGAGACGTGTAGACGAGTATGTTAAGGGGGGCAAGAAACTCAGCGACTGGACAGTGTGGGTGGCCCTGGAGACATACCTGCAGCTCCAAGGAAAGTTTGGCTGGGATGCCTTTAAAAAGGTGTTTGCTGCCTACCACAAGATTACCGACTATCCCAGTGACAACCACGGAAAGATGAACCTGTATGCTGAGACTTTCTCCCAGTCTGTGAGGATGAACCTGACGGGATTCTTTAAGGCCTGGGGCTGGCCCATAGATAGAGCCACTGAGAAGAAACTCTCCAACCTGCCTCTCTGGAGTGACCACCCGATGGTCTAGTATGAATGAATTTCAGACTGCAGCTGATTAAAAGTGCAGTCTATAATAATTACTAGTTCCAATTGAAAGGTAAATTTCAAGTCTTCTTTGAGGGTCATATTTACTCTAATATTTTTAAAGACATTTGGATGTTTCTTTTATGGAAAAGTAAGCTGTGTCTTTCATATGTAGGTCATGTGCTCTTAGGTTGTTAAAGGTTACGCTATTACTTCTACATTAATTCCTGTAATTGCTTTTTGGATGATGTTTTTACACTGTACGCCTCAAGGGGTGGTTTATCTTTTTGACAGaacaagaaaaacaatttaattcattcattaataCAATATAGTACAGTACCTGACAGTTGACTCAGGCTCTTTGCATAAGGCAGatactttttttacattcttttCCAGTTTTGTATGTTGATAATTGTCTTTACTGTCAATGAAAAAGACACAACTGTCActgtcatttattttcattcatcAAGTTGTGGTtgaataagaataataatatgGGATGCATTAAAGCTGTTGAATTTTATCACACAGTACACCATGTGGGCAacagtgtttttaaaatgaagcatttgGAGCAGCTTTGcttatttgatgatttttacGTACTCGCTTGATTCTTGCAATCTTTTGGGTGGGTGACATTAAAGAGGGAATGGCATCAACAA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825868.1 True 3580 mRNA 0.47 12 19872479 19891955

Neighbor

gene id symbol gene type direction distance location
sars2 sars2,LOC102787987 coding downstream 191459 19671088 ~ 19681020 (-)
LOC120545125 LOC106935408,LOC103155939,LOC106914189,LOC103474854,LOC102218288 coding downstream 201908 19663258 ~ 19670571 (-)
psma6l LOC107094495,LOC106935416,LOC103474855,LOC103155941,LOC100701743,LOC106914191,LOC102789735 coding downstream 218655 19650041 ~ 19653824 (-)
LOC120552636 LOC107395012,LOC103364872,LOC101485936 coding downstream 235077 19633493 ~ 19637402 (-)
nop53 NA coding downstream 263458 19598150 ~ 19609021 (-)
LOC120575210 tcaf2 coding upstream 587 19892542 ~ 19906151 (-)
LOC120575221 NA coding upstream 22168 19914123 ~ 19925101 (-)
si:ch1073-280e3.1 NA coding upstream 41538 19933493 ~ 19940419 (-)
nudt8 LOC107720444 coding upstream 57263 19949218 ~ 19953810 (-)
pcsk7 pcsk7 coding upstream 98764 19990719 ~ 20009181 (-)
G18216 NA non-coding downstream 16169 19851904 ~ 19856310 (-)
LOC120548779 coq8b,LOC103364879,LOC107395920,LOC108247334 non-coding downstream 116486 19754887 ~ 19755993 (-)
G18184 NA non-coding downstream 222827 19649216 ~ 19649652 (-)
G18179 NA non-coding downstream 243839 19625403 ~ 19628640 (-)
G18155 NA non-coding downstream 329808 19456213 ~ 19542671 (-)
G18329 cep164 non-coding upstream 161265 20053220 ~ 20054134 (-)
G18337 NA non-coding upstream 224330 20116285 ~ 20119606 (-)
G18366 NA non-coding upstream 292856 20184811 ~ 20258055 (-)
G18367 gap43 non-coding upstream 300925 20192880 ~ 20205688 (-)
G18381 NA non-coding upstream 814566 20706521 ~ 20706785 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 62349 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 155172 19701227 ~ 19717307 (-)
LOC120545639 eif4g1 other downstream 1649586 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1720511 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 1981818 17799999 ~ 17890661 (-)
LOC120547993 NA other upstream 245117 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1202222 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 1345233 21237188 ~ 21261923 (-)
LOC120572205 NA other upstream 1718859 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 1772121 21664076 ~ 21710363 (-)

Expression


Co-expression Network