si:ch1073-280e3.1


Basic Information

Item Value
gene id si:ch1073-280e3.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19933493 ~ 19940419 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825954.1
GGGTAATCAGTCATCAAATAAAGCAGCTGACTGCAGGTTGATACAGACactctcgctttgttttctgtcACTCAAAGACACAAATACCACTGATACAGACTCTGGTCATGTATGTCAAACCCATACTATGGATCCTACTCTTCACCTCTGTCCAGGAGGTGTCTCCGCAGGACTATAATTATGAAGATGAAACATACGAGGACCCACAGCCTCTGAACTGCTCAACCACAGAGAGCATCAAAGGTGGACATGTCACCTACTCACAGGGGGGGCTGGAAGGCAGCATGCTGACCTATCACTGCGGCCCGGGCCGATACCCTTACCCTGTCAGCCACAGGCTCTGCAGTGCTGACGGGGAGTGGTCGCCCATGAGATTAACCACTGGCAGACTGATGTCACGGGCCACATGCAAAGATGTGTTGTGTCCGGCTCAGCTCCAACTGGATCATGGTGACTTCTGGCCCAGGGACCAGTGGTCCCGTGTTGGGACAACGCAGAGCTTCTCCTGCCAGGAAGGGTTCACCCTGTATGGGTCCGCCCAGAGGAACTGCACCCTCTCTGGGGAGTGGACAGGAACCACTCCCGTCTGTGACAACCATGCTGACGACTGTAGTGACCCAGGGATCCCACCCGGGGCCCTGAGAACAGCAGGCCGGTTTCACACAGGAGAGGAGGTGATCTACCGGTGTCAGGTTGGTCTGGATCTTCTTGGGTCGGCTGAAAGGGTTTGCCTGGAGAGCAGGGAGTGGAGCGGTTCAACACCACGGTGCCAAGGCCCAAATACCTTTGACTCCCCCAGTGTTGTGGCAGCAGCCATGGCGGGGTCACTTGCAGGAGTCATGGATGTACTCTCACCAGACTCCAAAAAGAAAGgtggAGATATGTCCTTTGGCAGAACGTTTCGTGTGGCTGAAGGCAGTCGTATGAATGTCTACATTTTACTGGACACATCAGGAAGCATCGAAAAGAAGGACTTTGAATTATCCAGGAGTGCCACCATTGCTCTCATCAGAAAGTTGGACAGCTACGAGGTACAGCTCAAATTTCACGTGGTGTCATTTGCCACCGAGGCTAAAGACATTGTTGACATCACAGACTCGGGTATAAGTGGTAGCATCGACAACGTCATATGGAATCTGGAGCAGTTTAACTACAATAGCCATGGGCGCAAGACGGGCACCAACCTCCACGCTGCCCTGCACCGTGTCAGTGAGGTGATCAGCTTCTTGAAGCAAAACAGCGCCAAGAACCATTTTAATGAGACTCAGAACATCATCATCATAGAAACAGAtgGTTACTCCAACACAGGCAACAAGCCTCAGATTGCTCTGGCCAAGATCCGGAATCTGCTGGGCTACCACAACACATCCCGCGATCACACAGATGAAACAATGCTGGATGTCTATGTATTTGGTATTGGGAATGAAGTGAAGAAAGATGAGTTGAACTCTTTAGCCTCACAAAAACGTGGTGAGGAGCACATCTTCGTTTTGAAAAACTTTGAAATACTGGGACAGATGTTCAACAGCATCATTAGTGACAAGGGTGTGACGATGTGTGGGGTAGCTCAGGAAATGGTGGAGGATAATTCAGCCTACACGAGACCCTGGCACGTCACTCTGAAACCGGACACAAAGGCCACAAAGGCTACGCCGTGTGTTGGATCCATTGTGAGCCAGAACTGGGTGCTGACAGCTGCTCACTGCTTTGCCAGAGCGAGCACAGAAGTCCCTCAGCAGGTGGAGATACGTCACGGTGCGGGCTCATTGGTTCCCAAGAGGGTAATCATGCACCCAAAGTACAACACTAGGGCACTCAAACACAGAAATGTATCAGAGTTCTATGACTACGATGTAGCTCTGGTACAGGTGAACAAGAGTATCCCACTCTCCTGGAAAGCCAGACCTATCTGCTTGCCATGTACTGTACCAGCCAGCCGAGCCATGAAAAGAGTCAACTCCACCTGTCAGCAGCACAGGGATGAGCTACTACCGCACCAGGAGACTCCTGCCTTTTTCATCCATAAGAACTCTCAAAGGAAACAAACACATATTCAAGAGAGTCAAAGGCCTAGCTGTGTGGAGAAGGCCAGGCAAACACTCAAAGAGCCCACAGATGTAACTTTGGATGAGTATGTACCTGACAGATTCCTCTGTTCGGGGGGATCCTCAGCACACAAATACGCAATCACCTGTAAAGGTGACTCTGGTGGATCCTTGTTTCTgcaaaaaagaaatcgctaCTTTCAGGTGGGAGTTGTGAGCTGGGGCACCACGGACGTGTGTGACCCAGTCAACTCAGCTCTGAGAAAATACAGCAGCGACAAGCCGCCTCCTGATGCTCGAGACTTTCACATCGACCTGTTCAAGATAATGCCGTGGCTTAAAGAGCACCTGGGTGGGGAGATCCAGTTCCTGTCTGAGATCGACTGAGAACATCCATAATCAATCAGCTGAGAACTGCTTAGGTTAAGCCACAATGACTTAATGCAGAATGCAATAGAGCACAAGTGGAAATAATCATAGACAATCATACACAGTAATATCAAGTGTTTTCTAAAGCTTTATTGTCAAATGGATACTGTTGATTTTTATAGCTGTGGTGCAGTAAACACACTTGTAAAGGAAGATGCTTTGTCATACACAACATAAAAAGTAATTCTTCTTGTT

Function

NR:

description
complement factor B/C2-B precursor

GO: NA

KEGG:

id description
K01332 C2; complement component 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825954.1 True 2669 mRNA 0.49 19 19933493 19940419

Neighbor

gene id symbol gene type direction distance location
LOC120575221 NA coding downstream 8392 19914123 ~ 19925101 (-)
LOC120575210 tcaf2 coding downstream 27342 19892542 ~ 19906151 (-)
LOC120575197 NA coding downstream 41538 19872479 ~ 19891955 (-)
sars2 sars2,LOC102787987 coding downstream 252473 19671088 ~ 19681020 (-)
LOC120545125 LOC106935408,LOC103155939,LOC106914189,LOC103474854,LOC102218288 coding downstream 262922 19663258 ~ 19670571 (-)
nudt8 LOC107720444 coding upstream 8799 19949218 ~ 19953810 (-)
pcsk7 pcsk7 coding upstream 50300 19990719 ~ 20009181 (-)
bace1 bace1,LOC102782465 coding upstream 70711 20011130 ~ 20023355 (-)
LOC120550005 tbx10,LOC104965412 coding upstream 83428 20023847 ~ 20027797 (-)
LOC120550021 NA coding upstream 87922 20028341 ~ 20030788 (-)
G18216 NA non-coding downstream 77183 19851904 ~ 19856310 (-)
LOC120548779 coq8b,LOC103364879,LOC107395920,LOC108247334 non-coding downstream 177500 19754887 ~ 19755993 (-)
G18184 NA non-coding downstream 283841 19649216 ~ 19649652 (-)
G18179 NA non-coding downstream 304853 19625403 ~ 19628640 (-)
LOC120573122 NA non-coding downstream 392363 19538375 ~ 19541130 (-)
G18329 cep164 non-coding upstream 112801 20053220 ~ 20054134 (-)
G18337 NA non-coding upstream 175866 20116285 ~ 20119606 (-)
G18366 NA non-coding upstream 244392 20184811 ~ 20258055 (-)
G18367 gap43 non-coding upstream 252461 20192880 ~ 20205688 (-)
G18381 NA non-coding upstream 766102 20706521 ~ 20706785 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 123363 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 216186 19701227 ~ 19717307 (-)
LOC120545639 eif4g1 other downstream 1710600 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1781525 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 2042832 17799999 ~ 17890661 (-)
LOC120547993 NA other upstream 196653 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1153758 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 1296769 21237188 ~ 21261923 (-)
LOC120572205 NA other upstream 1670395 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 1723657 21664076 ~ 21710363 (-)

Expression


Co-expression Network