nudt8 (LOC107720444)


Basic Information

Item Value
gene id nudt8
gene name LOC107720444
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 19949218 ~ 19953810 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826021.1
TTTTGAGTTATAATAAGAGTTTTGTCTTAGCAACACCCTTTATTAGCACTAAAGCTGAAGAGTTGTTAATTGAGTTTGGCGTCACCACAGCGCAGTGAGGGCACTGACGCCTATGAAGCTTCTCTGCGCCATATTACCTAGTGGCGGCCGGCTAGCTGGGTGAGAGCAATACACCCATGGGTGAGAGGCCAGCAGCTGTTGTTGATTCAACGGTCAAAGATGTTTAGGAGCCCCCAGGTCCTGACTTGGTCTTGTCCCATAAGGCCATTGCAGCTATTGAGAGAATCCCACCTCTCTGCTTTCTCTGAGTACAATGCTGCTGGATGGCAGGGTGCAAAAGATGTGAAGAGAAGGAAATATGAAGGGTTCTGTGGAAGTAAGGATGGCTCATCATTGTCCACAGAGACTGTATCCCGTTCAACAAAGTTGTCTTTATTTAACTTGGACTGTGATAATCGGAAGCAGAGGGAGGCTTCATTTCAAAACCTTCCACCCAAAGCCATTTTGTCCAGCCATCATCACCTACCTCAGGTTTCTGCCTCTGCAAAAGCCAAACGGGGGTCTGACTCTTGGAAATGCACTGTAGTGAAAGATGTAGGTCGAAACCTCAAAGCTGTGAGCACTCTCCGGCACTGTTTAATCAACACAACTTGCTTTCAACCTTGGAGAAGGTCTTGGGACGTTTGCCAACCTTCACTCAGTTTCACCTTTGCGCCTCAGTGTAACCTTCTTCAAAGCCATGTATATTGCAGACAGCACTTTGTTAGACCTTTCAGCTCGTCGACACATACGCCATGGACTTTGAACCACTCTCACAGTAGACGACAAACCTCCAGCCTCTCTTCTCACAAAACCAGAGCAGTTCATCAGGCTGCCCCTCACGTGGCAGACGCCTGGAGAGACTGTCTATCCCTGAAGAATGAAAACAGGTGTCGACTGAGCCTGGGGCCCAACTTGAAGCTTTACAAGGTGGACAAGGGGGAAAAAGGGGCAAGTCACAGCCAGGGAAAGAACCAGGGGAGATGGGCGTCAGTCCTGGTTTCTCTGTGCTCCGTAGAGGGGGAGCCGGCATTTCTCTTCACTTTGCGCTCCAGCACACTGAAGGGCAGGCACAAGGGTGACGTCAGCTTTGCAGGAGGAAAGAGTGATCCATCAGATAGAGATTTGGTGGCCACCGCTTTAAGGGAAGCCAGGGAGGAGCTGGGCGTTTCTGTGGCAACCGAGAAGGTCTGGGGCATCTTGAAGCCTCTCAGGGACAGGTCAGGGATGATGATAGCGCCTGTGCTGGCTAACCTCGGCCCCCTCGAGGAGTTGTCCTTCAAACCAAACCCTGGAGAGGTTGAGGAGATTTTCACCTTGTCCTTGTCCCACTTATGCAACCCTCAGAACCGTGGCTACACACACTTCCGCACTGGCGACAAGTACGGATACACTCTCCCAGTGTTTCGTAACGGGAAGCATCGAGTGTGGGGCCTGACTGCCGTCGCTCTAGACCATACTCTGAAACTCATTGTCCCTCTATAGCAGCTCAATTACCATTTGATTACAGTACACTTACAATACTGAAGCACACCTTTAATGTGACTCAAAGATTTGACTATGACAAATGTGCAAGCAAGCTTTGTGTAGCAAATTCATGTCAGGAATCAGTGTGtatacaaaatatttttattcaTAAAGGTAAATTCCTTTTCAATCAGAAGGATTTTTCCAATTGTGCACTTTCTGAGCCTTGGGTGTCTAAGAATCTCGATTGAATGGATCATGTGTATAAACATGGTGGCCAGCTGTGATTATGTCCCTGATTAAAGGGCAGGTGTTGTGTGAAGTCTGGATGGATGTTTTAAGACAGACTGTAGCAAAACGGTGCACaccgttttgagattgaacgtggCTTGAGAGAGGAAGTTATGACGTCATACGCGACCTTTGGGTGTGTAGTCTTTAACGTATTTCACGACAAACTGGCTTTAttgacttgcaaaattatcttaTACATTAACAAACctcatatgtgtaattcatggcacAATTCAAGCGGTGGTCCAccagaaggggagggactttgcATCTATGACAGATCGTGGCTTCCAGTGTGATTCAGCTCATGGCCACTTTTGATCTCACAGTAAAACAAATCTGGACAGCTATAAACACTGAAATGATACAAGCACATCATGATGTGTGTTGATGCAATAAAGGTTGTTTTAAAGGTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106580825 isoform X1

GO: NA

KEGG:

id description
K18665 NUDT8; nudix motif 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826021.1 True 2216 mRNA 0.47 5 19949218 19953810

Neighbor

gene id symbol gene type direction distance location
si:ch1073-280e3.1 NA coding downstream 8799 19933493 ~ 19940419 (-)
LOC120575221 NA coding downstream 24117 19914123 ~ 19925101 (-)
LOC120575210 tcaf2 coding downstream 43067 19892542 ~ 19906151 (-)
LOC120575197 NA coding downstream 57263 19872479 ~ 19891955 (-)
sars2 sars2,LOC102787987 coding downstream 268198 19671088 ~ 19681020 (-)
pcsk7 pcsk7 coding upstream 36909 19990719 ~ 20009181 (-)
bace1 bace1,LOC102782465 coding upstream 57320 20011130 ~ 20023355 (-)
LOC120550005 tbx10,LOC104965412 coding upstream 70037 20023847 ~ 20027797 (-)
LOC120550021 NA coding upstream 74531 20028341 ~ 20030788 (-)
sidt2 sidt2 coding upstream 106123 20059933 ~ 20078143 (-)
G18216 NA non-coding downstream 92908 19851904 ~ 19856310 (-)
LOC120548779 coq8b,LOC103364879,LOC107395920,LOC108247334 non-coding downstream 193225 19754887 ~ 19755993 (-)
G18184 NA non-coding downstream 299566 19649216 ~ 19649652 (-)
G18179 NA non-coding downstream 320578 19625403 ~ 19628640 (-)
LOC120573122 NA non-coding downstream 408088 19538375 ~ 19541130 (-)
G18329 cep164 non-coding upstream 99410 20053220 ~ 20054134 (-)
G18337 NA non-coding upstream 162475 20116285 ~ 20119606 (-)
G18366 NA non-coding upstream 231001 20184811 ~ 20258055 (-)
G18367 gap43 non-coding upstream 239070 20192880 ~ 20205688 (-)
G18381 NA non-coding upstream 752711 20706521 ~ 20706785 (-)
si:ch211-11n16.2 LOC104927205,LOC101481481,LOC100694251,LOC103369702,LOC107094496 other downstream 139088 19800751 ~ 19810130 (-)
fbxo46 fbxo46,LOC102786997 other downstream 231911 19701227 ~ 19717307 (-)
LOC120545639 eif4g1 other downstream 1726325 18179013 ~ 18222893 (-)
zgc:165508 fam131a,LOC102799247 other downstream 1797250 18127466 ~ 18151968 (-)
LOC120552194 NA other downstream 2058557 17799999 ~ 17890661 (-)
LOC120547993 NA other upstream 183262 20137072 ~ 20141538 (-)
si:ch1073-340i21.1 NA other upstream 1140367 21094177 ~ 21097201 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other upstream 1283378 21237188 ~ 21261923 (-)
LOC120572205 NA other upstream 1657004 21610814 ~ 21615246 (-)
gdpd5b gdpd5,LOC103357216 other upstream 1710266 21664076 ~ 21710363 (-)

Expression


Co-expression Network