aifm4 (LOC104966742)


Basic Information

Item Value
gene id aifm4
gene name LOC104966742
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 29519140 ~ 29526322 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826430.1
ATGTGATTCCGGCTGGCTGTCACGCGGGCAGTTCTGCGCTCGCTCCTAACGACCCGACCCACGTGTGTTTGTTCCTACGGACAACACTGCCGAGGATTCGAGGCAGACGCATCATTTCTGACTGTTGTGGCGGAAGAAAGCAGTAATGCATCAGGGCCAAGATGAGTATCAGGAGCAGGTGACTGGGATGGTATGTCAGGAGGCTGACCTGAAAGATGGACAGATGAAGGAAGTGACCGTGGGGGACCAGAAGGTGTTGCTTGTCCGTACTCAGGGTCAGTACAGTGCTGTTGGAAGCCAGTGCTCTCATTACAATGCTCCTCTTATCAAAGGAGCACTTGTTGGTGACAGGGTGAGGTGTCCCTTTCATGGTGCATGCTTTAATGTCAGAACTGGAGATATCGAAGAGTATCCAGGTCTGGACTGTCTGCCTAGTTATAAGgtaAAAGTTGAGGATGGAAAGGTGTATGTTTCCATCAACAAAAATTCTCTGAAGTTGAAGAAGCGGGTGAAGGAGATGTGCAGCATGGTCCCAGACATTAAACACACTATCCTGCTGATTGGAGGAGGCCCTGCCTCCCTGGTTTGTGCTGAAACACTGCGGCAGAACTGCTACCAAGGTCGAATCATTATGGTAACCAGAGACAACCTGCCTCCATTTGACAAGCCCAAACTGAGTAAGGCTATGAAtctggacagcagcagcatcctCCTCCGACCAAGTGACTTCTATCAACAGTATGGGATTGAGGTGTGGACACAGAAGGAGgTGGTGTCGGTGAACCCAGCTGATAAGGTGGTGAagttgggtgacggcactttGCAGCATTACGACCAGCTTCTGATCTCAACTGGTTGTAGAGCGCGGCCGCTCGGCTGTCCTGGTTGGGACCTGAAGGGAGTAAAGTTGCTGCAGAGATATGAAGACGCCAAAGAGATTCACAACTCCTGTCTGGGCCAGAAAGCTGTTGTGATCGGAGCCTCCTTCATAGGTATGGAGGTGGCATCCTACTTATCAGGCAAAGCTGCCAGTGTGGCCGTGGTTGGCACTTCCGGATACCCGTATGAGCGATCTCTGGGGCCAGAGATCGGCAAAATGTGTATACAAATGTTGGAAGAAGAAAATGTAAAGTTCTACATGAATGATGGAGTCACTGAGATCCAAGGGGAGAATGGCAAGgtgAAGTGGGTGGTGCTGAAGACTGGTATAGTCCTGGAAGCTGATGTGGTAATTGTTGGAATTGGTGTAATCCCCAATTCAGACTTCTTGGCAGGAAGCAAGTTGGAAGTGGATTCAAGGAAAGCTGTGATTGTTGACAAGTTCATGAGGACCAATATACCAGATATTTTTAGTGCTGGAGATGTTACCTCTTTCCCTCTGACCATTCGTGGAGACCAAAGGGTCAACGTGGGCCACTGGCAAATGTCACAAGCTCAAGGAAGAGTAGCTGCCCTGAACATGCTGAAGACACCCACCAAATGTGAGTCTGTTCCTTTCTTCTGGACTGTTTTACTTGGAAAGAGCATCCGATACACAGGCTATGGAGAAGGATTCACAGAAATCATATTCAAAGGCAGCGTGGAAGAAAGGAAGTTCCTGGCATTTTACATAAAAGATGAGGTGGTGGTAGCTGCAGCCAGCCTGATGTTTGACCCTGCTGTGGCTCGTCTTGCAGAGCTGATGGCTACTGGCCAGATCTTAACAAAGGCTCAGGCTCAGGCTGATGACCTGAGCTGGCTGCAGATGTAACCAGAGGTGTGCTGTATCCAGGAGTTAACACCTCTCAGTGATGAAGGATGTCGTCTTTCTCCTTATTGttcctctctccatcacgtaGTACTAAATTGAGTTGCTCCATTTACTGCCTCAGGGCGTCTGAAAGCCAATCAGACCTCTTCTCTTATGCAGAGCACTGTTACCATAGCAGCATGCAAAGCTTTATGCACTTAGTGCAATGGGAATACTCTGAGCTCTGTGTAAGGAGCACAACAGTCTGGATGACACAGCAGTTTTACTTGTATTCATTCCAAGTTTTAACTACAGCTGTACTAAAAGTGGGTCGTCTCTGGTTAATATTAACTACACAACAACATAAATATATCCATACATTTTTGTGAACTTGAAATTCCAAGATTCCATAAACATTAATTTTATAGTATTTGGTAGTAGTCCTcgtaaaataataatagtaattttATCCACTTAAAACATTCCGAAAATACACACCACTCCACTTGTCTTAgttaaaatatatttctgaGTAATTTAATGagtaaaaaatctaaaatacaaaggtcagtttaaataCTGCACTCACCAAATATGGTGATGCACATGTTTATCAACAATttaatttgaatttttttaaacttttattgTCATTACCAGTTTAATTTTTAATTCAATGCTTAAATCGATCATACACGTTTAGCAGCAGACATTTAACTTATTTAGTCTTTATCATACAACTTGAAATTTAAATCCACATGAAGAGAATACGAAAGCACTTTGTGTAATCTGACCTTTTACTTACTTAAAATGAAGTGCTTTTATTAtttcttattatttatttattttttataatatgcTTTTTGGTCCATAGCTAAAGCTCAGGTATTGAACGGATCTGTTCAGGAGTTTCAACACCTCTGATTGTCCACATCATACTCGCTGTTGTCAGCCTGAGGATGGGTTTTCTGTCAGGATACTTTTCCTGAAATGGTTTGTTACATTAATCATTGTTCATCTGTAGATAACCTTTGCTACTTCATTTGTTTTAGATTTTCACAGTCTGACAGGTGCTTTTGCAATGGTGTAATCTTCAGGTGCAGTTATGTTTTTTAGGatttttatttctgcttttgttATTCATTGCTGGTTTGAGTCTGTGTCCCTGTTTCTGTCAAACTGGCCTTTTTGTGCTCTTGTGAgtataacattttataaaacaccCATTACCTGCAAGCAGTA

Function

NR:

description
apoptosis-inducing factor 3-like

GO: NA

KEGG:

id description
K22747 AIFM3; apoptosis-inducing factor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826430.1 True 2971 mRNA 0.43 19 29519140 29526322

Neighbor

gene id symbol gene type direction distance location
trnaw-cca NA coding downstream 6420 29512649 ~ 29512720 (-)
prpf8 prpf8 coding downstream 10761 29491164 ~ 29508379 (-)
LOC120545703 rilp,LOC104966718 coding downstream 28496 29477893 ~ 29490644 (-)
LOC120545693 scarf1 coding downstream 41586 29469093 ~ 29477554 (-)
LOC120553635 sarm1,LOC102788660 coding downstream 54908 29458234 ~ 29464232 (-)
sept4b LOC103353393,LOC102798639,LOC102292831,LOC102194568,LOC101473185 coding upstream 193694 29720016 ~ 29771339 (-)
limk1a limk1,LOC100693040,LOC102194872,LOC101472506,LOC102798153,LOC102292112 coding upstream 249203 29775525 ~ 29829377 (-)
elna NA coding upstream 304165 29830487 ~ 29889063 (-)
psph psph,LOC102797258 coding upstream 418911 29945233 ~ 29951475 (-)
LOC120575091 phkg1 coding upstream 429184 29955506 ~ 29963599 (-)
G20408 NA non-coding downstream 50253 29443337 ~ 29468887 (-)
G20407 NA non-coding downstream 85134 29433055 ~ 29434006 (-)
G20350 unc119 non-coding downstream 136849 29362929 ~ 29382291 (-)
G20348 LOC104922853,LOC102220912,LOC103367115 non-coding downstream 158213 29359442 ~ 29360927 (-)
LOC120573394 NA non-coding downstream 220718 29297340 ~ 29298422 (-)
G20425 tlcd2,LOC107103571,LOC104967200 non-coding upstream 6244 29532566 ~ 29553100 (-)
G20431 NA non-coding upstream 26992 29553314 ~ 29553568 (-)
G20458 NA non-coding upstream 67082 29593404 ~ 29598747 (-)
G20463 NA non-coding upstream 78517 29604839 ~ 29606154 (-)
G20480 pafah1b1,LOC106581047 non-coding upstream 126821 29653143 ~ 29656085 (-)
G20417 scarf1 other downstream 70485 29447170 ~ 29448655 (-)
cwf19l2 cwf19l2 other downstream 1671592 27824605 ~ 27847548 (-)
G19840 NA other downstream 2430076 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 3049244 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 3073205 26434281 ~ 26445935 (-)
im:7138535 NA other upstream 441107 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 561413 30087735 ~ 30091711 (-)
cbl cbl other upstream 628571 30154893 ~ 30198071 (-)
arhgef12a arhgef12 other upstream 1042551 30568873 ~ 30618434 (-)
spa17 spa17,LOC103353395,LOC106919647,LOC107380342,LOC100697535 other upstream 1159889 30686211 ~ 30696629 (-)

Expression


Co-expression Network