LOC120544051


Basic Information

Item Value
gene id LOC120544051
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8894784 ~ 8896382 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636432.1
GTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGTCTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGTCTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGTCTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTG
>XR_005636433.1
CTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGTCTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGTCTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTGTAGTAAACACACATGTGTAACAGGACTAACCTGTAGTAAACACACATGACTAACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636432.1 True 868 lncRNA 0.39 5 8894784 8896380
XR_005636433.1 False 828 lncRNA 0.39 6 8894784 8896382

Neighbor

gene id symbol gene type direction distance location
atg16l1 atg16l1 coding downstream 14738 8849490 ~ 8880046 (-)
LOC120554459 NA coding downstream 20164 8874341 ~ 8874620 (-)
LOC120554461 NA coding downstream 34144 8860361 ~ 8860640 (-)
LOC120554466 NA coding downstream 40192 8854312 ~ 8854592 (-)
LOC120543840 LOC100693035,LOC101486393,LOC103152962,LOC103475253,LOC106951493 coding downstream 53408 8828413 ~ 8841376 (-)
LOC120543996 NA coding upstream 25054 8921436 ~ 8923366 (-)
LOC120551100 NA coding upstream 299605 9195987 ~ 9201417 (-)
LOC120544027 ap2m1,LOC108440593,LOC106580654,LOC106612407 coding upstream 591940 9488322 ~ 9502894 (-)
LOC120551135 LOC101071594,LOC102800178,LOC103356830 coding upstream 627825 9524207 ~ 9531095 (-)
LOC120543835 NA coding upstream 634639 9531021 ~ 9543141 (-)
LOC120544086 NA non-coding downstream 7873 8885926 ~ 8886911 (-)
G15832 NA non-coding downstream 9269 8884856 ~ 8885515 (-)
G15826 NA non-coding downstream 92806 8801446 ~ 8801978 (-)
G15819 NA non-coding downstream 116242 8778030 ~ 8778542 (-)
G15812 NA non-coding downstream 143836 8750411 ~ 8750948 (-)
G15836 NA non-coding upstream 21642 8918024 ~ 8920817 (-)
G15851 NA non-coding upstream 72900 8969282 ~ 8970613 (-)
G15853 NA non-coding upstream 84806 8981188 ~ 9056979 (-)
G15858 NA non-coding upstream 99658 8996040 ~ 9078952 (-)
LOC120544059 NA non-coding upstream 122695 9019077 ~ 9019842 (-)
LOC120544569 dgkd,LOC102780004 other downstream 152661 8692074 ~ 8742123 (-)
G15771 NA other downstream 237821 8601917 ~ 8656963 (-)
G15757 NA other downstream 425024 8468357 ~ 8469760 (-)
LOC120551075 LOC103475274,LOC105922519 other downstream 739481 8137301 ~ 8155303 (-)
trnaa-cgc NA other downstream 958457 7936256 ~ 7936327 (-)
G15820 NA other upstream 75532 8971914 ~ 9046433 (-)
LOC120543625 NA other upstream 234602 9130984 ~ 9210517 (-)
G15903 NA other upstream 341585 9237967 ~ 9238784 (-)
eif2a eif2a other upstream 451827 9348209 ~ 9433655 (-)
LOC120551129 NA other upstream 617094 9513476 ~ 9522231 (-)

Expression


Co-expression Network