LOC120544094


Basic Information

Item Value
gene id LOC120544094
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8482230 ~ 8483294 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636449.1
GTGGTTTACAGGTAATTTGCATATGATTTGCATACTGTGAGAGACTGCACCTCCACAGGCATCCTCACAGATTACCTATATCTGCAATGGcttccacaagttcacctggaacctccaaatctaaGATATACAAGATCTTTTCTTGGAGGGGGACCATGACAGAGTGACAGAAGAGTCTGCCAGTGGAGTACTTTTACCACCCATCCAGTGCCCTCTGAGGCTACAGACTATGGCAGAACTGAGGGCAGCCATTTACCCTGTGACTAACTCCTAGTACAATGGCGGATAGCTTTGCAAGACTGCACTTAACTATGTGATTCTTCACACATAAACATGGCAGGATAACACAGGAAAAccattttgttgtttaaaatgaCACATACCACTACTACTTTATATGTAGTACTGATTTTAATCCTTAACAGTTTTTGAAATaacatgcatttacagtatggaCTCCAGCAAAACAGTTAAATCTGTACCTTTTCAatgaataacaaataaatatattcaagtAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636449.1 True 521 lncRNA 0.40 2 8482230 8483294

Neighbor

gene id symbol gene type direction distance location
LOC120543718 NA coding upstream 12470 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 59894 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 175020 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 356561 8123625 ~ 8125669 (+)
LOC120551067 NA coding upstream 363584 8115385 ~ 8118646 (+)
rnf168 NA coding downstream 64324 8547618 ~ 8566587 (+)
mindy4b NA coding downstream 775783 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 800170 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 825905 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 825913 9309207 ~ 9329512 (+)
G15471 NA non-coding upstream 3812 8478169 ~ 8478418 (+)
G15461 NA non-coding upstream 45492 8435932 ~ 8436738 (+)
G15448 NA non-coding upstream 118984 8362900 ~ 8363246 (+)
G15447 NA non-coding upstream 128132 8353728 ~ 8354098 (+)
G15445 NA non-coding upstream 147752 8334185 ~ 8334478 (+)
G15487 NA non-coding downstream 20523 8503817 ~ 8504154 (+)
G15491 NA non-coding downstream 29361 8512655 ~ 8702189 (+)
LOC120544074 NA non-coding downstream 47950 8531244 ~ 8534741 (+)
G15497 NA non-coding downstream 96577 8579871 ~ 8602270 (+)
G15498 NA non-coding downstream 103089 8586383 ~ 8596399 (+)
G15415 NA other upstream 309739 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 589757 7858053 ~ 7892473 (+)
rffl rffl other upstream 628801 7806809 ~ 7853429 (+)
LOC120543808 NA other upstream 654143 7826610 ~ 7828087 (+)
G15234 NA other upstream 990173 7491365 ~ 7492057 (+)
LOC120543817 LOC104967478 other downstream 68297 8551591 ~ 8621654 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other downstream 312776 8796070 ~ 8808975 (+)
G15525 NA other downstream 366207 8849501 ~ 8850871 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 423436 8906730 ~ 9098564 (+)
G15540 NA other downstream 443298 8926592 ~ 8930270 (+)

Expression


Co-expression Network