LOC120544096


Basic Information

Item Value
gene id LOC120544096
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8894477 ~ 8895255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636450.1
TGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGGGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGG
>XR_005636454.1
TACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636450.1 True 413 lncRNA 0.40 4 8894483 8895255
XR_005636454.1 False 386 lncRNA 0.39 4 8894477 8895255

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 327890 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 424717 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 472141 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 587267 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 768808 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 363822 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 388209 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 413944 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 413952 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 436312 9331567 ~ 9339168 (+)
LOC120544125 NA non-coding upstream 84 8893503 ~ 8894393 (+)
G15530 NA non-coding upstream 16927 8876220 ~ 8877550 (+)
G15524 NA non-coding upstream 60087 8833920 ~ 8834390 (+)
G15518 NA non-coding upstream 65199 8800370 ~ 8829278 (+)
G15485 NA non-coding upstream 116529 8776638 ~ 8777948 (+)
G15517 NA non-coding downstream 3964 8899219 ~ 8899672 (+)
G15514 NA non-coding downstream 7580 8902835 ~ 8916243 (+)
G15516 NA non-coding downstream 29114 8924369 ~ 8926498 (+)
G15543 NA non-coding downstream 55007 8950262 ~ 8952015 (+)
G15567 NA non-coding downstream 223382 9118637 ~ 9119355 (+)
G15525 NA other upstream 43606 8849501 ~ 8850871 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other upstream 85502 8796070 ~ 8808975 (+)
LOC120543817 LOC104967478 other upstream 272823 8551591 ~ 8621654 (+)
G15415 NA other upstream 721986 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 1002004 7858053 ~ 7892473 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 11475 8906730 ~ 9098564 (+)
G15540 NA other downstream 31337 8926592 ~ 8930270 (+)
G15552 NA other downstream 98926 8994181 ~ 9091968 (+)
G15565 NA other downstream 218587 9113842 ~ 9122292 (+)
G15572 NA other downstream 377644 9272899 ~ 9354628 (+)

Expression


Co-expression Network