LOC120544104


Basic Information

Item Value
gene id LOC120544104
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9229697 ~ 9233965 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636455.1
AGCAGGCCATATTTGAACTTAGGTCACAGCGTAAAGGACTGAGCCTCACAGGACACGATCCACTAGCTATCGAGGCTCCCTTGCTTTTATTCCTCTTTAAGgtcaacGCAGAGTTTCAACAAATCACCACCATAAATCTTGAGGCAAAATTCATGTCAATTTTGGACCTTCATTCCCCTAAACTCCTTTCCAGAGAGAAACATCGTGCAGAAATGAATATTTCCTACAGAGTGGAATTTCCATTCAGAAAACCATAGAAGTCATCCGATCAATCatcaatgatcaatcatcaatcACCTTGGTGAAGATGATCAAAGAGTTTGAGGTGATGGCTGTGTACCTGTTCCGGAATAAAAGTGGACAGGTCAATGATGTTGGGATCGTCATTGAAGGTTCCATTGTACTCAACCATCTTGGGGATCTTAGCAGATCCTGTTGCTTCCTGCTAGCACTGACCCTATGCTTTGGATCTGAAATATCCCAAAACTCATGGAAGTGGATTCCGGAAACCTTTCAGCAAAGGTGCAAAGACTGAAACAATGTGGTCATATAGGTTGCTGAGAGGCAGCTGTTCAgatgagaaaatatgttttatttaatcaGACAATCTCCAGGTGTGGTCAGGCTCAAAGTGTTGGACAGATTTCAATTCTTATAACAAGAATGAATTTATTACGCTTTATTTTTCCATGTCTTTGGGTgtaaacacatttacaacatAAGTTCCTTATGACTTGGCCATTTAGTTGTTTATTCCTTTTAAAACATTGCTCTGGGTTGTCCTTTTATATTCGAAGTAGATGTGTATAAAATCAGTGTCTCACCCTGCCTGCAGACTGTAATGTGTTGTGTAAATGTAGAATGCTAAAAGATGACTACAGTATTTTTTGAGTGTAAATGATTGATACCCGATGGCCGGAGTCAAGTTTTTGCATCTAACAGGTTCAGATTGTTATAAGTGTCTAGCGACATTGTGAATAGGATACCTTATGCACTTCTCACTTATTTGCGCTATACTTTGTCATTGATGTTGCTACTAGTGTTTCACATGTGCATGCATTGCAATCAAATAAAACGTTCATGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636455.1 True 1086 lncRNA 0.39 4 9229697 9233965

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 663110 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 759937 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 807361 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 922487 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 1104028 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 25112 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 49499 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 75234 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 75242 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 97602 9331567 ~ 9339168 (+)
G15571 NA non-coding upstream 53892 9172832 ~ 9175805 (+)
G15567 NA non-coding upstream 110342 9118637 ~ 9119355 (+)
G15543 NA non-coding upstream 277682 8950262 ~ 8952015 (+)
G15516 NA non-coding upstream 303199 8924369 ~ 8926498 (+)
G15514 NA non-coding upstream 313454 8902835 ~ 8916243 (+)
G15575 NA non-coding downstream 24461 9258426 ~ 9273836 (+)
G15577 NA non-coding downstream 198397 9432362 ~ 9599857 (+)
G15629 NA non-coding downstream 251136 9485101 ~ 9506128 (+)
G15613 NA non-coding downstream 251236 9485201 ~ 9488596 (+)
G15632 NA non-coding downstream 284066 9518031 ~ 9653954 (+)
G15565 NA other upstream 107405 9113842 ~ 9122292 (+)
LOC120543609 LOC108250351,LOC108250349 other upstream 131133 8906730 ~ 9098564 (+)
G15552 NA other upstream 137729 8994181 ~ 9091968 (+)
G15540 NA other upstream 299427 8926592 ~ 8930270 (+)
G15525 NA other upstream 378826 8849501 ~ 8850871 (+)
G15572 NA other downstream 38934 9272899 ~ 9354628 (+)
G15605 NA other downstream 140189 9374154 ~ 9378204 (+)
serp1 NA other downstream 177525 9411490 ~ 9485847 (+)
G15628 NA other downstream 224513 9458478 ~ 9459217 (+)
G15640 NA other downstream 364348 9598313 ~ 9669529 (+)

Expression


Co-expression Network