LOC120544109


Basic Information

Item Value
gene id LOC120544109
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7382638 ~ 7388682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636456.1
ctggtGTCtgctggactgaagagtccacattgcagactggaaactctcagtctgtcaggctgtctggtCACAGAGGAAGGCTGTTCTTCTCTGGCCTtagctctgagctccaacccctcctatctgagagagctggacctgagctacaatcatccaggagactcaggagtgacGCTGCTGTCAGCAGGGCTTGAGGATCATGACTGGAAACTGAAAACTCTCAGGGTGGACCATGGTGGACCGCAGTGGTTGAAACCTGGTGTGAGGAAGTATGGCTGTCAGCTggaactggacacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636456.1 True 298 lncRNA 0.54 4 7382638 7388682

Neighbor

gene id symbol gene type direction distance location
or55e1 LOC104939064 coding upstream 441204 6935046 ~ 6941434 (+)
LOC120543617 NA coding upstream 453053 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 471148 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 483056 6898638 ~ 6899582 (+)
LOC120545533 LOC101478539 coding upstream 488141 6893550 ~ 6894497 (+)
trnal-cag NA coding downstream 23148 7411830 ~ 7411912 (+)
LOC120543955 NA coding downstream 42261 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 146417 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 185042 7573724 ~ 7603726 (+)
LOC120551040 NA coding downstream 223566 7612248 ~ 7640011 (+)
G15156 NA non-coding upstream 21429 7326575 ~ 7361209 (+)
G15162 lrch3 non-coding upstream 26081 7354998 ~ 7356557 (+)
G15144 NA non-coding upstream 53419 7309629 ~ 7329219 (+)
G15155 NA non-coding upstream 58920 7323253 ~ 7323718 (+)
LOC120544121 NA non-coding upstream 104342 7277923 ~ 7278296 (+)
G15171 NA non-coding downstream 2731 7391413 ~ 7392310 (+)
G15174 NA non-coding downstream 12083 7400765 ~ 7402776 (+)
G15179 NA non-coding downstream 36758 7425440 ~ 7459538 (+)
G15236 NA non-coding downstream 106378 7495060 ~ 7541926 (+)
G15243 NA non-coding downstream 278460 7667142 ~ 7745991 (+)
G15019 NA other upstream 393242 6972845 ~ 6989396 (+)
spcs2 spcs2 other upstream 965129 6407985 ~ 6417509 (+)
rnf169 NA other upstream 978213 6393062 ~ 6404425 (+)
G14344 NA other upstream 1854019 5510757 ~ 5528619 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other upstream 1965503 4801340 ~ 5417135 (+)
G15173 LOC102077075 other downstream 9419 7398101 ~ 7399141 (+)
G15234 NA other downstream 102683 7491365 ~ 7492057 (+)
rffl rffl other downstream 418127 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 437928 7826610 ~ 7828087 (+)
LOC120543711 LOC102298536 other downstream 469371 7858053 ~ 7892473 (+)

Expression


Co-expression Network