LOC120544125


Basic Information

Item Value
gene id LOC120544125
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8893503 ~ 8894393 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636461.1
AGTCCTGTTACACATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGTCATGTGTGTTTACTACAGGTTAGTCCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTACTACAGGTTAGACCTGTTACACATGTGTGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636461.1 True 213 lncRNA 0.39 3 8893503 8894393

Neighbor

gene id symbol gene type direction distance location
rnf168 NA coding upstream 326916 8547618 ~ 8566587 (+)
LOC120543718 NA coding upstream 423743 8429225 ~ 8469760 (+)
nyap2a LOC103360223 coding upstream 471167 8399400 ~ 8422336 (+)
LOC120551081 NA coding upstream 586293 8244631 ~ 8307210 (+)
LOC120543907 NA coding upstream 767834 8123625 ~ 8125669 (+)
mindy4b NA coding downstream 364684 9259077 ~ 9275432 (+)
LOC120551113 NA coding downstream 389071 9283464 ~ 9301261 (+)
LOC120543803 NA coding downstream 414806 9309199 ~ 9315322 (+)
LOC120543792 NA coding downstream 414814 9309207 ~ 9329512 (+)
LOC120543784 NA coding downstream 437174 9331567 ~ 9339168 (+)
G15530 NA non-coding upstream 15953 8876220 ~ 8877550 (+)
G15524 NA non-coding upstream 59113 8833920 ~ 8834390 (+)
G15518 NA non-coding upstream 64225 8800370 ~ 8829278 (+)
G15485 NA non-coding upstream 115555 8776638 ~ 8777948 (+)
G15519 NA non-coding upstream 139081 8751741 ~ 8754422 (+)
LOC120544096 NA non-coding downstream 84 8894477 ~ 8895255 (+)
G15517 NA non-coding downstream 4826 8899219 ~ 8899672 (+)
G15514 NA non-coding downstream 8442 8902835 ~ 8916243 (+)
G15516 NA non-coding downstream 29976 8924369 ~ 8926498 (+)
G15543 NA non-coding downstream 55869 8950262 ~ 8952015 (+)
G15525 NA other upstream 42632 8849501 ~ 8850871 (+)
LOC120544007 LOC106595375,LOC106565963,LOC106611916,LOC106588692,LOC106572435,LOC106612550,LOC106583987,LOC103477372 other upstream 84528 8796070 ~ 8808975 (+)
LOC120543817 LOC104967478 other upstream 271849 8551591 ~ 8621654 (+)
G15415 NA other upstream 721012 8170696 ~ 8172491 (+)
LOC120543711 LOC102298536 other upstream 1001030 7858053 ~ 7892473 (+)
LOC120543609 LOC108250351,LOC108250349 other downstream 12337 8906730 ~ 9098564 (+)
G15540 NA other downstream 32199 8926592 ~ 8930270 (+)
G15552 NA other downstream 99788 8994181 ~ 9091968 (+)
G15565 NA other downstream 219449 9113842 ~ 9122292 (+)
G15572 NA other downstream 378506 9272899 ~ 9354628 (+)

Expression


Co-expression Network