LOC120547199


Basic Information

Item Value
gene id LOC120547199
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10443726 ~ 10451113 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637036.1
tggttatgtttaaggtTACGGTGAGGGTTAGTGCCTGTaaggcgacgttggaggcttaaatCACCATCGATCCCACTGTGCACACAGTGTCTGTCTCCgtcaaggagagaagacggctggcgaaattcacgagttcacgaaagCTCTCCCCGGATGTGCAGtttcctctctcatcttttaATCTCCTCATCAGGTTTCTCCGATCGCCAACAGGAAGCTGCTAGTTCAAGTGACCTTGTCACTGAAAGGAGCACCCTGGAGATGCTTCTCTTTCCCTCTGGGCTACGGCCACTTCATCCTCTCTGGCCTTCAGACCTGGAGCCCACGAGAACACGATCCTAAATCTCACTGTTCTTCACTCGTCTCAGCTTGTGTTTTCTGCTGGCCTGGAAACACATGATAGCAAACATGGGTTGTTATTGGTCTCTTCTAACTAAATATTTGATGCTAAAAACCCTGATTAATTGAACCCAAGCTTCCCCTGAATAAAGATGTGCAGTACCTTCGAGGTGACGCAGAGGGCAGTGATGAGTGACATCATACCCAGCAGGAGGACAACAAGTCTGATGATCAACTCGGATAGAGAAGCTGAAACAGATTTAAAATCATCACTGTCTGATCATTTTAATCAAAGATTCTCTGTGAAGTTACCTGCAGGAGTGAGATGGAGCGGCCGGCTCTCAGAAGAGAAGTTATGGGAGAAAACGTAGAGGTG
>XR_005637037.1
tggttatgtttaaggtTACGGTGAGGGTTAGTGCCTGTaaggcgacgttggaggcttaaatCACCATCGATCCCACTGTGCACACAGTGTCTGTCTCCgtcaaggagagaagacggctggcgaaattcacgagttcacgaaagCTCTCCCCGGATGTGCAGtttcctctctcatcttttaATCTCCTCATCAGGTTTCTCCGATCGCCAACAGGAAGCTGCTAGTTCAAGTGACCTTGTCACTGAAAGGAGCACCCTGGAGATGCTTCTCTTTCCCTCTGGGCTACGGCCACTTCATCCTCTCTGGCCTTCAGACCTGGAGCCCACGAGAACACGATCCTAAATCTCACTGTTCTTCACTCGTCTCAGCTTGTGTTTTCTGCTGGCCTGGAAACACATGATAGCAAACATGGGTTGTTATTGGTCTCTTCTAACTAAATATTTGATGCTAAAAACCCTGATTAATTGAACCCAAGCTTCCCCTGAATAAAGATGTGCAGTACCTTCGAGGTGACGCAGAGGGCAGTGATGAGTGACATCATACCCAGCAGGAGGACAACAAGTCTGATGATCAACTCGGATAGAGAAGCTGAAACAGATTTAAAATCATCACTGTCTGATCATTTTAATCAAAGTTACCTGCAGGAGTGAGATGGAGCGGCCGGCTCTCAGAAGAGAAGTTATGGGAGAAAACGTAGAGGTGATAAACACAGCGGTACTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637036.1 False 715 lncRNA 0.47 4 10443746 10451113
XR_005637037.1 True 722 lncRNA 0.48 4 10443726 10451113

Neighbor

gene id symbol gene type direction distance location
LOC120574326 NA coding downstream 90887 10342382 ~ 10352839 (-)
LOC120551206 NA coding downstream 101068 10257611 ~ 10342658 (-)
LOC120551203 NA coding downstream 195655 10227228 ~ 10248071 (-)
zgc:162698 tmem87a,LOC101066087 coding downstream 264928 10153891 ~ 10178798 (-)
dharma NA coding downstream 592058 9847998 ~ 9851668 (-)
si:cabz01090165.1 LOC100707198,LOC102192222 coding upstream 42002 10493115 ~ 10567391 (-)
LOC120547527 LOC103361823,LOC107379843,LOC108244675 coding upstream 1045059 11496172 ~ 11501340 (-)
gdpd4a LOC102208771,LOC101483676,LOC102301321,LOC100692992,LOC103373497 coding upstream 1169558 11620671 ~ 11642942 (-)
pak1 pak1,LOC100698864,LOC101483196 coding upstream 1248786 11699899 ~ 11793201 (-)
capn5a capn5,LOC100709916,LOC102310670,LOC106535735 coding upstream 1362166 11813279 ~ 11865934 (-)
G16136 NA non-coding downstream 66915 10353195 ~ 10376811 (-)
G16137 NA non-coding downstream 70446 10363132 ~ 10373280 (-)
G16081 NA non-coding downstream 206199 10236498 ~ 10237527 (-)
G16029 NA non-coding downstream 310586 10132868 ~ 10133140 (-)
G16028 NA non-coding downstream 312787 10130348 ~ 10130939 (-)
G16162 NA non-coding upstream 18702 10469815 ~ 10505332 (-)
G16164 NA non-coding upstream 50422 10501535 ~ 10553975 (-)
LOC120543595 LOC108245180 non-coding upstream 573874 11024987 ~ 11025980 (-)
LOC120549056 NA non-coding upstream 641799 11092912 ~ 11102774 (-)
G16174 NA non-coding upstream 681991 11133104 ~ 11133336 (-)
G16143 LOC103372137,LOC102304476 other downstream 18956 10373568 ~ 10424770 (-)
LOC120574316 NA other downstream 112879 10318834 ~ 10330847 (-)
LOC120574297 NA other downstream 242142 10184003 ~ 10201584 (-)
G16064 NA other downstream 294155 10140176 ~ 10149571 (-)
G16066 NA other downstream 305379 10136688 ~ 10138347 (-)
G16407 cul5,LOC101165410,LOC108248946 other upstream 1498224 11949337 ~ 11955578 (-)
G16422 NA other upstream 1537905 11989018 ~ 12033762 (-)
G16458 NA other upstream 1773946 12225059 ~ 12262775 (-)
LOC120554324 NA other upstream 2035904 12487017 ~ 12487180 (-)
LOC120554526 NA other upstream 2037760 12488873 ~ 12489063 (-)

Expression


Co-expression Network