LOC120554358



Basic Information


Item Value
gene id LOC120554358
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 12538712 ~ 12538875 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005638378.1
ATACTTACCTGGCAGGGGAGATACCATGATCAAGAAGGTGGTTCACCCAGGGCGAGGCTTGGCCATTGCACTCCGGCTGAGCTGACCTCTGCGAATTCCCCAAATGTGGGAATCTCGACTGCATAATTTGTGATAGTGGGGGACTGCGTTCGCGCTCTCCCCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005638378.1 True 164 snRNA 0.55 1 12538712 12538875

Neighbor


gene id symbol gene type direction distance location
rsf1a LOC104946006,LOC107735935,LOC107600325 coding downstream 100173 12419105 ~ 12438539 (-)
clns1a clns1a coding downstream 127440 12395939 ~ 12411272 (-)
myo7aa myo7a,LOC101484135,LOC100692718 coding downstream 152672 12288657 ~ 12386040 (-)
LOC120550388 NA coding downstream 339048 12198103 ~ 12199664 (-)
LOC120550222 NA coding downstream 424263 12106269 ~ 12114449 (-)
LOC120551266 NA coding upstream 7943 12546818 ~ 12567602 (-)
LOC120554543 NA coding upstream 9572 12548447 ~ 12548637 (-)
LOC120554458 NA coding upstream 13266 12552141 ~ 12552304 (-)
LOC120554474 NA coding upstream 16609 12555484 ~ 12555647 (-)
LOC120554546 NA coding upstream 17735 12556610 ~ 12556800 (-)
G16531 NA non-coding downstream 94703 12443629 ~ 12444009 (-)
G16528 NA non-coding downstream 122799 12413484 ~ 12415913 (-)
G16525 NA non-coding downstream 143875 12394490 ~ 12394837 (-)
G16439 NA non-coding downstream 280088 12257150 ~ 12258624 (-)
LOC120550509 NA non-coding downstream 283134 12253995 ~ 12255578 (-)
G16554 NA non-coding upstream 37358 12576233 ~ 12576583 (-)
G16676 NA non-coding upstream 283554 12822429 ~ 12822922 (-)
G16678 NA non-coding upstream 330006 12868881 ~ 12911173 (-)
G16688 NA non-coding upstream 476750 13015625 ~ 13137068 (-)
G16706 LOC101165163 non-coding upstream 584844 13123719 ~ 13125662 (-)
LOC120554536 NA other downstream 1190 12537332 ~ 12537522 (-)
LOC120554533 NA other downstream 13503 12525019 ~ 12525209 (-)
LOC120554489 NA other downstream 14773 12523768 ~ 12523939 (-)
LOC120554653 NA other downstream 23358 12515191 ~ 12515354 (-)
LOC120554530 NA other downstream 27158 12511364 ~ 12511554 (-)
LOC120554618 NA other upstream 962 12539837 ~ 12540022 (-)
LOC120554398 NA other upstream 2345 12541220 ~ 12541383 (-)
LOC120554539 NA other upstream 3390 12542265 ~ 12542455 (-)
LOC120544465 islr2 other upstream 87090 12625965 ~ 12630092 (-)
srsf7a srsf7,LOC103358184 other upstream 115730 12654605 ~ 12662190 (-)

Expression



Co-expression Network