LOC120554600


Basic Information

Item Value
gene id LOC120554600
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3272979 ~ 3273169 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638531.1
ATTGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATcagtttaatatctgatatGTCCTCTATCAGGGGACAACATATTAAATGGATTTTTGCCGATGGGAGTAGAAAGGGGCCTTGTCCCGTCGGCTCCACGCATTGACCCGTTATTGCAGCGCCGGCCGGGAACGGTGCACCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638531.1 True 191 snRNA 0.48 1 3272979 3273169

Neighbor

gene id symbol gene type direction distance location
gmnc NA coding upstream 228829 3034809 ~ 3044150 (+)
LOC120571294 NA coding upstream 332256 2934777 ~ 2940723 (+)
LOC120570793 NA coding upstream 338274 2889025 ~ 2934705 (+)
LOC120570832 NA coding upstream 400577 2853218 ~ 2872402 (+)
LOC120544728 NA coding upstream 455418 2805911 ~ 2817561 (+)
LOC120554633 NA coding downstream 1308 3274477 ~ 3274667 (+)
LOC120554604 NA coding downstream 2811 3275980 ~ 3276171 (+)
LOC120554596 NA coding downstream 4311 3277480 ~ 3277670 (+)
LOC120554647 NA coding downstream 5806 3278975 ~ 3279162 (+)
LOC120554626 NA coding downstream 7238 3280407 ~ 3280598 (+)
LOC120571786 NA non-coding upstream 76627 3195512 ~ 3196352 (+)
G14017 NA non-coding upstream 106807 3132604 ~ 3166172 (+)
G14019 NA non-coding upstream 108368 3164270 ~ 3164611 (+)
G13934 NA non-coding upstream 238270 2941473 ~ 3034709 (+)
G13925 NA non-coding upstream 292632 2962287 ~ 2980347 (+)
LOC120571720 NA non-coding downstream 270300 3543469 ~ 3548600 (+)
G14087 NA non-coding downstream 296933 3570102 ~ 3571280 (+)
G14096 NA non-coding downstream 400347 3673516 ~ 3744025 (+)
G14112 NA non-coding downstream 448783 3721952 ~ 3735039 (+)
G14118 NA non-coding downstream 526271 3799440 ~ 3845186 (+)
LOC120544739 NA other upstream 276664 2977851 ~ 2996315 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other upstream 308207 2948634 ~ 2964772 (+)
LOC120571130 NA other upstream 480134 2610872 ~ 2792845 (+)
G13555 NA other upstream 534791 2726319 ~ 2738188 (+)
LOC120571187 NA other upstream 978091 2263410 ~ 2294888 (+)
G14148 NA other downstream 746075 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 964402 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 1090497 4363666 ~ 4449830 (+)
G14246 NA other downstream 1094434 4367603 ~ 4420822 (+)
G14209 LOC102792843 other downstream 1227004 4500173 ~ 4527377 (+)

Expression


Co-expression Network