LOC120571679


Basic Information

Item Value
gene id LOC120571679
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4864864 ~ 5088097 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641261.1
ACCTGTAAGGGAGAGGAGAATAGAAATGGAGGAGAGGCTACTTgaaatggaggagagaggatTGATGGAGAGACTTGAATGGCAGAAGGAGAGAATAACAATGGAAAGGGAAATTGAAATGTTAAGAAGAAGATTGAGGACCCAGAAGAGACCAGAGTCTCCTGAACCTGAAccaacctgaacctgaacctgaacccagctgtgtgtcctttaaGAGCGACCGGTCACAGGAACGCTTTATTAACTTTAAAGGAGAACAACCCTCTGCTGAAAAGAGGATCCATCAAAGACCAGACTCTGctggacctgaacccagctgtgtgtccttcaagAGTGACCGGTCACATGATCACTTTATTAACTTTAAAGGTCAACAACCCTCTGCTGAAAAGAGagtggaccaggagaTCTCAGAGGTTCCCAGTGCtcagtctgcccagcagcatcaaacacacctggactccatatttatgctgctggaggagaacatctgcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641261.1 True 497 lncRNA 0.47 5 4864864 5088097

Neighbor

gene id symbol gene type direction distance location
LOC120544944 NA coding upstream 639547 4223592 ~ 4225317 (+)
LOC120571237 NA coding upstream 665508 4185906 ~ 4199356 (+)
LOC120544917 NA coding upstream 710348 4150582 ~ 4154516 (+)
LOC120571287 LOC105358025 coding upstream 1321659 3537939 ~ 3543205 (+)
LOC120554338 NA coding upstream 1516942 3347816 ~ 3347922 (+)
LOC120571428 NA coding downstream 78114 5166211 ~ 5173445 (+)
LOC120571154 NA coding downstream 131553 5219650 ~ 5230445 (+)
LOC120572059 NA coding downstream 359049 5447146 ~ 5461510 (+)
LOC120549121 NA coding downstream 455194 5543291 ~ 5547333 (+)
col4a3 NA coding downstream 553557 5641654 ~ 5711859 (+)
G14287 NA non-coding upstream 12164 4816925 ~ 4852700 (+)
G14281 NA non-coding upstream 66609 4780651 ~ 4798255 (+)
G14280 NA non-coding upstream 84567 4774497 ~ 4780297 (+)
G14272 NA non-coding upstream 89812 4702308 ~ 4775052 (+)
G14274 NA non-coding upstream 90712 4704653 ~ 4774152 (+)
G14211 NA non-coding downstream 37720 5125817 ~ 5159690 (+)
G14316 NA non-coding downstream 120253 5208350 ~ 5209612 (+)
G14317 NA non-coding downstream 125094 5213191 ~ 5306999 (+)
G14318 NA non-coding downstream 126214 5214311 ~ 5262960 (+)
G14322 NA non-coding downstream 146871 5234968 ~ 5249597 (+)
LOC120571647 LOC103360213,LOC102310147 other upstream 12289 4237571 ~ 4852575 (+)
G14209 LOC102792843 other upstream 337487 4500173 ~ 4527377 (+)
LOC120570718 LOC103473932 other upstream 415034 4363666 ~ 4449830 (+)
G14246 NA other upstream 444042 4367603 ~ 4420822 (+)
G14148 NA other upstream 809779 4019244 ~ 4055085 (+)
G14344 NA other downstream 422660 5510757 ~ 5528619 (+)
rnf169 NA other downstream 1304965 6393062 ~ 6404425 (+)
spcs2 spcs2 other downstream 1319888 6407985 ~ 6417509 (+)
G15019 NA other downstream 1884748 6972845 ~ 6989396 (+)
G15173 LOC102077075 other downstream 2310004 7398101 ~ 7399141 (+)

Expression


Co-expression Network