LOC120571720


Basic Information

Item Value
gene id LOC120571720
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3543469 ~ 3548600 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641278.1
aaataagtgTGCTGCTGAATGGTATTATTGGTAGTTTCGGAATGATAAAAAGTGAATATGTATTATAAGGTtttattttagatgtttttgttttatgtaattgTAATAATTCTAAATTATAACCAAGCCATGTTGGGGGCCTCAAAATAGAGAAGCGGTGGGGGTGTTGCTGCTGTGGGTATCATCTACTTAAATATTTAAAGAGGCTAGAAGTCAGAAGTTTTACTAGTCTGATAGAGCAGCCCAACAGTGGTGTATGCTGCTGTATAATTATTTCCGTACACTTTCACCACAGATGTTCAGAACAATTGGAGAGGTGGAGTCAGGAAAATAACTAGAGTTATGCACTTTATCTTGCGTGTTGGTGTGCAACACTCTTTGCATTTGTTGTAACTGATCATGTTGTGATCATACATTTATCTTTGGCACCCAGcaaactgttttaaaaaatgcaaaggCTGTTTGAATAAAGGTTTTGTGAAAATATAAGCTTAATTTGTCCCTTTTTTACAGCAGGTCGAGGTTCGTTCCCACCAGATCCATTATGGAAGCAACATCTGGTATTTAAATCATCAAATTCAGTAAAGAACCGCTTTGTTAAGCAGTTCTGGTGTTTTTCATTGCCGATCATTTGACaaaccattttttattttacaaatgtgtttatttgtaatGTGTTCAATCATATGACATCAAAAACAATCAAATACGTTCATCAAGTAAAAGAGCAGTGAAAATGAAGCATAAAAGTAAAATCATCTTGTTTAAAGTTTGGATTTTGAAATAATCTACTCTAGTGTGTTGTTTCAATCAACAAAATGCTTGTCATGAATTGTGCAGTGCCCAACAGTGGTGTTGATTGTATTCCAATAGACATAACATGACTGGTCCCCAGGAAGGACAGAAATTCAGGTTTAGTCCCCAGGGGGGGAACAAATTCATTTTTGAGAGTGTTTGATGTTTAAAGTGATTTTTGTGTTCACATAAAATTATCATGATTTTAGCAGTTAAAATCATGTCTATACACTCCTTAGAAAGGGGGGATCCCATCAGGCTGCTGCCTGTCACTGGATCCCACGATGTAATAAAAAcgggtgtgtttgtttgtttgtttgtttgtttgtttgtttgtttgtgtgtgtgtgtgtgtataatctACGTAGGCAGGAGAAGCGCTGGACTGCCGAAGAACAGGCGAGGACCTGGAAGAAGAGCAAACTGTGTGTAGATTTATTCTTATTCCCATTCCTCTGCTGCCCGCTGTAACCTTTTTATCTGATGCACAAACAAGAAGAGGGCCAAGGAGGAGGCGAGGGCCAGGAAGAAGGGCTGGCCTTTCCACGAACGGAAAGCGTACACGTGCCAGCTGTGTGGCATGCCCAAGACCAACCAGTAGGGGCAACGGGGAGGTACAAAAAGTCCTACTGGAAAACAAACACCTCTGTTGGACTCAACACCGTGATGCGGGCTGCATACGGCAACAGCAGCAACCCCGGCCAGAATCCCTCCATCAGCAGGTTGGTGGAGGCCATCTGCATCAGGCTGTGCAGGGAGCATCCAAAAGGCAGACAGATTTTGTGGGAAGAGGTACAATTGTTGGACATCTATCCTGAATGACTACACTTTGAGCAGGGAAAACCTAATCACCAGCGATGTGATAATGTCCAAGACGAGGCTTCAGCTCTTCACCATAAACCTGAGGACCCTGACTAAATGGTACAGTGATAGAGGGAAGGCCATGGATTTGAGGATGCTGCAGCAGGCCATTCCCTCCGCCAATTGGCGTGGCATCCGTGGCCCAATGCCCATTGGTTAATCCAGCTAAATCTGACCAATGAGAGAGCAGCTAATGCGGTAATGCACTATTTACTTGGTTTGCCAACCGGCAGAAAGAAAAACGAGGAAAATGGTTAGAGGAACAACGAAGACGatagagaaaaaaagcaaaaaaactgcCTGAAGAAGCCACCATGACAATGCTTCGCTAGGGGTGTCACCACAGACAGTCACCAGCTCTATGGCCTCTTCATGGCGAGGCTATCCTTCGCCATTTTCGAGTGGGATGCTGAGGATGTCGCCCGCCTGAGAGAGGCCAAGCAGTCCGTGGAGGGGAGGGAAGCCCACATCAAGCTGTCCGGCAAGGAGCTGGCTCGCCAGGAGGTGCTGGACGCCTTCTGGACGCTGACAGACACCATGGGCGTCCCCTTGATCGACCGCGCCCACATGGAGGAGATCTGGAGCACGCAGCGCCGCCACCTCGACTGCATCCAGGACCCAGAGGGGGTGGAGCTGTACACCCGGACAGGAGAGGTCACCGAGGGGGGTGTGAAGCTCCCCGTCTTCAGGTGTGCTCGAGGCTCCACTTCCCTGGAGTCCTTCCACCTGCACCAGTGTCGCTTCATCCCAGGTACAACTGCGAGTGATGTCCACGGACACTGATGAGGGCttcgaggaagaggaggagccaGAGGAGATCCGTCTCCTTGCACATCACAGCGCTCTCCTCCAGAAGCCCCACTGTGTGCCTGATGTCGGAGAGGCCTCGTCATCCCAGTCGGAACCCCACCACCCACCTCCTGACCACAACAGGATAGAGGTGCAGCAGGCTGagctggaggaagaggaggatGAAGTCATTGGGCCAGACGGTCACCCCGGTTACGATCACTTGGTGGCCCTGGCCCACGCCCTCGTGGAGTTGCGTCACCACGCCTTCGTCACACAGCGTCGGTCCAGAGAGATAATCGCTCTCTGGGAGAAGCTGACTGACCGTGACAAGGTGCCGGTGAGCTTCCCCCCCCTGCCACCAGGACAGGCTGGTCAAGGGGAGGTTTAATTAGCGGACCCTGACGCTGTGGCACAACAAATGGAGCAAGGCAATTATGAGGGACACTGTCACCATAGCAGTTCCGGGGCCCAGTGCTCCCCAGACTGCAGCTGAGCCCCTGCCTGCCCCACGGACTCTGCTGCAGCAGCCCCAACAGCCAGACCAGCCCCTCCAGCATCAACTGCCTACAGATAACTCTGGTCTGGCTGCCACCATCCGAGGGCCGCTTGCCCCGGAACTGTTTGACCTCATTGCCGCCCACCAAAAGTGCCaccgcctcctcctccactgctCCCCCGATGGACACCACCCCATCCTCTGCCCCAGCTCCCCGATGGACACCACCCCATCCTCTACTCCCCCGATGGACACCACCCAATCCTCGGCCCCTGTCCCCCCGATGGACACCACCCAATCCTCGGCCCCTGTCCCCCGATGGACACCACCCCATCCTCTGCTCCCCCGATGGACACCACCCCATCCTCTGCCCATGTCCCCCCGATGGACACCACCCCATCCTCTGCTCCCCCGATGGACACCACCCCGTCCACCAGTGGCACTCCTGCTCCCTCCACCAGCActgctgcagcctctgctgGAGCCATCCCCCGCTCTACTGAGTGGAGGCACAGGGTTCACGCAGAGCAGGCACGTCGGGCCCAGGAGGAAGGGCGCTTgcttaagcccctcaaaaagggcTCCCGCTTCAATTCTAGGCGCTGTGGCCAgccaaaaacaaaagaatacGGCCACAGCCACTACAAAAGGGAGACCTATTGTGCCCGGGCCGACGGGGGAACGTTGGAGCAGTGGCTGCTTAAAATGAAGCGTAGGGAGCGCGAGGGGCCACCCCCACCACCTTGACTTTTTAACATGGCATAAGTGTTgacttttcctggttttaaaggctgcattacagtaaagtgatgtcacagccaaaagacaaaaagacagcGACATTTAGAGAACGCTGTGACGCAGTCAGAATGGAAGCGGTAACTACGGAAAAACAGGATGGACAATCGAGAGCAGAAGCGAGGGAGGTAGAAAGACAATACaataaagagaaagacagagataaATATGGAGAACGACAAATATAGACAGATGCTGTTAGGCCTACTATCACATGAGAAACAGGTACAGGCATGCGTTGCAGGCAAGGGTAGAAACAAGACTACGAGAGAGAAGAGCGCAAACAAAGGAAAATCAGGGCAAAGCAGCTAGAAAGAGTGGAAAATATGTGTACTACAACATGAGGAAAAGAAGACCTCCTATTGCaggtaaatgtttattttatgtaatttagAAACCGACAGTAGCCTACCTCTCAAGGATCACATGCATGCATTACAGGCAAAgtaaaggcagaaaaaaagactattaGAGAGAGAACTCCCCACCACCATGACGATGTATCAGCTGCACCCCCCCACCATGACCCCCATGAACGCAAAAGACAGCAACAATTAAAGAAACAAAGTGACGCAGCCAGAATGGAAGAGATAACTACTACTAATAgttttaatattgtaatataattgTATGCCATGTGtgttttttctaaataaatgtttgaaaGTTAACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641278.1 True 4418 lncRNA 0.50 6 3543469 3548600

Neighbor

gene id symbol gene type direction distance location
LOC120571287 LOC105358025 coding upstream 264 3537939 ~ 3543205 (+)
LOC120554338 NA coding upstream 195547 3347816 ~ 3347922 (+)
LOC120554582 NA coding upstream 234997 3308282 ~ 3308472 (+)
LOC120554643 NA coding upstream 236486 3306793 ~ 3306983 (+)
LOC120554577 NA coding upstream 237985 3305294 ~ 3305484 (+)
LOC120544917 NA coding downstream 601982 4150582 ~ 4154516 (+)
LOC120571237 NA coding downstream 637306 4185906 ~ 4199356 (+)
LOC120544944 NA coding downstream 674992 4223592 ~ 4225317 (+)
LOC120570934 NA coding downstream 1373487 4922087 ~ 5063976 (+)
LOC120571428 NA coding downstream 1617611 5166211 ~ 5173445 (+)
LOC120571786 NA non-coding upstream 347117 3195512 ~ 3196352 (+)
G14017 NA non-coding upstream 377297 3132604 ~ 3166172 (+)
G14019 NA non-coding upstream 378858 3164270 ~ 3164611 (+)
G13934 NA non-coding upstream 508760 2941473 ~ 3034709 (+)
G13925 NA non-coding upstream 563122 2962287 ~ 2980347 (+)
G14087 NA non-coding downstream 21502 3570102 ~ 3571280 (+)
G14096 NA non-coding downstream 124916 3673516 ~ 3744025 (+)
G14112 NA non-coding downstream 173352 3721952 ~ 3735039 (+)
G14118 NA non-coding downstream 250840 3799440 ~ 3845186 (+)
G14140 NA non-coding downstream 373197 3921797 ~ 4015612 (+)
LOC120544739 NA other upstream 547154 2977851 ~ 2996315 (+)
zgc:162872 LOC103361195,LOC100694875,LOC101467947,LOC102198539,LOC102776046 other upstream 578697 2948634 ~ 2964772 (+)
LOC120571130 NA other upstream 750624 2610872 ~ 2792845 (+)
G13555 NA other upstream 805281 2726319 ~ 2738188 (+)
LOC120571187 NA other upstream 1248581 2263410 ~ 2294888 (+)
G14148 NA other downstream 470644 4019244 ~ 4055085 (+)
LOC120571647 LOC103360213,LOC102310147 other downstream 688971 4237571 ~ 4852575 (+)
LOC120570718 LOC103473932 other downstream 815066 4363666 ~ 4449830 (+)
G14246 NA other downstream 819003 4367603 ~ 4420822 (+)
G14209 LOC102792843 other downstream 951573 4500173 ~ 4527377 (+)

Expression


Co-expression Network