LOC120571732 (LOC108249964)


Basic Information

Item Value
gene id LOC120571732
gene name LOC108249964
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4599848 ~ 4624533 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641280.1
gtcaggctgtctgatctcagaggaaggcagttcttctctggcctcagctctgagctccaacccctcccatctgagagtgctggacctgagctacaatcatccaggagactcaggagtgaagctactGTCAGCGGGACTGGAGGATCCAAACTGGAGACTAGACACTCTCAGggtggagcctgctggagtcagatatttgacaccaggtctgaggaagtattcctgtgaa

Function

NR:

description
PREDICTED: protein NLRC3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641280.1 True 229 lncRNA 0.54 3 4599848 4624533

Neighbor

gene id symbol gene type direction distance location
LOC120544909 NA coding downstream 461295 4088176 ~ 4138553 (-)
LOC120544902 LOC103361205,LOC106936657,LOC106910224,LOC103150884,LOC103475299 coding downstream 521720 4052192 ~ 4078128 (-)
LOC120571031 NA coding downstream 675992 3921782 ~ 3923856 (-)
LOC120571265 fgf12,fgf12b,LOC104939444,LOC102791340,LOC102235588,LOC107670129 coding downstream 808166 3739762 ~ 3791682 (-)
LOC120570954 NA coding downstream 877177 3662000 ~ 3722671 (-)
LOC120570840 NA coding upstream 37081 4661614 ~ 5252192 (-)
LOC120571626 NA coding upstream 324646 4949179 ~ 4975582 (-)
LOC120544953 NA coding upstream 628461 5252994 ~ 5267295 (-)
LOC120570786 NA coding upstream 677272 5301805 ~ 5326758 (-)
LOC120548458 NA coding upstream 841417 5465950 ~ 5472587 (-)
LOC120571696 NA non-coding downstream 31125 4565920 ~ 4568723 (-)
G14631 NA non-coding downstream 49203 4550342 ~ 4550645 (-)
G14626 NA non-coding downstream 70019 4494668 ~ 4529829 (-)
G14616 NA non-coding downstream 114047 4412003 ~ 4485801 (-)
LOC120571703 NA non-coding upstream 5742 4630275 ~ 4634119 (-)
G14636 NA non-coding upstream 14630 4639163 ~ 4640044 (-)
G14588 NA non-coding upstream 57864 4682397 ~ 4775530 (-)
G14637 NA non-coding upstream 68767 4693300 ~ 4711579 (-)
G14586 NA non-coding upstream 77636 4702169 ~ 4705999 (-)
LOC120571085 mb21d2 other downstream 544764 4028740 ~ 4055084 (-)
LOC120544895 LOC102787186 other downstream 583892 3899453 ~ 4015956 (-)
G14426 il1rap,LOC106536183,LOC107379882,LOC108229411,LOC106536182 other downstream 877216 3472937 ~ 3722632 (-)
LOC120570817 NA other downstream 1371024 3056729 ~ 3228824 (-)
G13995 iws1 other downstream 1615350 2981061 ~ 2984498 (-)
G14579 NA other upstream 438455 5062988 ~ 5111979 (-)
G14553 LOC108250350,LOC108250351,LOC108241855,LOC108249964,LOC107380983,LOC108242154,LOC108242155 other upstream 534797 5159330 ~ 5350376 (-)
LOC120554300 cldn1,LOC103361214 other upstream 864723 5489256 ~ 5510035 (-)
G14722 NA other upstream 885988 5510521 ~ 5533827 (-)
col4a4 LOC104946957 other upstream 930941 5555474 ~ 5639200 (-)

Expression


Co-expression Network