LOC120571738


Basic Information

Item Value
gene id LOC120571738
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4606962 ~ 4607658 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641282.1
TGGGTCGTGTACACTCCACAGCGAGCATTGGCTTCACTGATGGCTTTAACCAGATAGTTCCCAGTGTTTGCCCTGGCTCAAGGAAAATCTCCACTAGCTAAACAGTACTTGGAGGCCAGAGAAGAAGCACTCACCGAGAATCTACAAGGAATGGACTTCAGAGCGGTGTTCATCCTCCTGtcaatcatttttaaaatgagtgTGGATCATCACATCATGATTGGAGAGGGTGAACCCAACACACCATTCCCAATTGTCCAGGTGACCCAAGAAGACTGGAAGTCCACATTTGGGGGACGTAGCTGTTGTTCCCTGAAGGTAGACGGGGTCGAGGTGTGTGAAGGCATGAAGGTAGAGGAAGCAACGATCTCATcgttttattcttattttgtttttgatcTTGAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641282.1 True 407 lncRNA 0.46 3 4606962 4607658

Neighbor

gene id symbol gene type direction distance location
LOC120544944 NA coding upstream 381645 4223592 ~ 4225317 (+)
LOC120571237 NA coding upstream 407606 4185906 ~ 4199356 (+)
LOC120544917 NA coding upstream 452446 4150582 ~ 4154516 (+)
LOC120571287 LOC105358025 coding upstream 1063757 3537939 ~ 3543205 (+)
LOC120554338 NA coding upstream 1259040 3347816 ~ 3347922 (+)
LOC120570934 NA coding downstream 314429 4922087 ~ 5063976 (+)
LOC120571428 NA coding downstream 558553 5166211 ~ 5173445 (+)
LOC120571154 NA coding downstream 611992 5219650 ~ 5230445 (+)
LOC120572059 NA coding downstream 839488 5447146 ~ 5461510 (+)
LOC120549121 NA coding downstream 935633 5543291 ~ 5547333 (+)
LOC120571765 NA non-coding upstream 47791 4558142 ~ 4559171 (+)
G14266 NA non-coding upstream 56340 4550340 ~ 4550622 (+)
G14265 NA non-coding upstream 67178 4539328 ~ 4539784 (+)
G14264 NA non-coding upstream 77342 4529278 ~ 4529620 (+)
G14224 LOC107835021 non-coding upstream 91672 4494326 ~ 4515290 (+)
G14222 NA non-coding downstream 17141 4624799 ~ 4661600 (+)
G14197 NA non-coding downstream 18311 4625969 ~ 4759659 (+)
G14208 NA non-coding downstream 53604 4661262 ~ 4728114 (+)
G14196 NA non-coding downstream 75071 4682729 ~ 4770456 (+)
G14201 NA non-coding downstream 77054 4684712 ~ 4703651 (+)
G14209 LOC102792843 other upstream 79585 4500173 ~ 4527377 (+)
LOC120570718 LOC103473932 other upstream 157132 4363666 ~ 4449830 (+)
G14246 NA other upstream 186140 4367603 ~ 4420822 (+)
G14148 NA other upstream 551877 4019244 ~ 4055085 (+)
LOC120544739 NA other upstream 1610647 2977851 ~ 2996315 (+)
G14187 LOC107380983,LOC108250349,LOC108250351,LOC103477369,LOC103473932,LOC107835021,LOC106936810,LOC102294474,LOC102776571,LOC108229490,LOC103360213,LOC107834023,LOC103368570,LOC102214284,LOC102800009,LOC101480046,LOC101470105,LOC102792843 other downstream 193682 4801340 ~ 5417135 (+)
G14344 NA other downstream 903099 5510757 ~ 5528619 (+)
rnf169 NA other downstream 1785404 6393062 ~ 6404425 (+)
spcs2 spcs2 other downstream 1800327 6407985 ~ 6417509 (+)
G15019 NA other downstream 2365187 6972845 ~ 6989396 (+)

Expression


Co-expression Network