LOC120571774


Basic Information

Item Value
gene id LOC120571774
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 989851 ~ 991035 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641298.1
tgtgcagtacctaggtaaggacaactAGCCACTTAGAtgcagagtagggcgggcccTGATAGCATGGTAGTGTGATCCAAAACAAACTGATCCGATCTAGCATCTATCTACCGGTAACCATGGCTTCAGCTCAGCCGTACATGTTCCAACCAGAGTCTGATCCCGAAACAGAACCCGAACCAGCTTCACAACCTAGACTGGAGCAAGATGTTTCAGAGTGGTAAGTTAATTAAGTATTTCAGTTTGAATTCTGCACCGTTTCTATCACAGTAACAACTTTATGTCCATTGACTGTCTGGAGGGTatctaacgttttttttttttatatttaggtGTACTTGTGGAAATTGCTCGAcaatgtccactgaagtttaaAACATCTGTTGCCAAGAAATACAAATggtTGTTAGAATGCAACAGGTTCCTGTCCCACCTACCTGCATGGTTTATCATCCAGACTTGGAGCCAACCTGTTTGAACCACTACACCCTGCGGAACTTCTACACTATATACAGAGCAGACTATGGACCTTTGAGGCACCTTGCCTATCTTGGCTTTGTGAACTGGTGCTGGGGCTACTTGGGAAGGACTGTTAGGGTGGTAATCCCGT
>XR_005641299.1
tgtgcagtacctaggtaaggacaactAGCCACTTAGAtgcagagtagggcgggcccTGATAGCATGGTAGTGTGATCCAAAACAAACTGATCCGATCTAGCATCTATCTACCGGTAACCATGGCTTCAGCTCAGCCGTACATGTTCCAACCAGAGTCTGATCCCGAAACAGAACCCGAACCAGCTTCACAACCTAGACTGGAGCAAGATGTTTCAGAGTGgtGTACTTGTGGAAATTGCTCGAcaatgtccactgaagtttaaAACATCTGTTGCCAAGAAATACAAATggtTGTTAGAATGCAACAGGTTCCTGTCCCACCTACCTGCATGGTTTATCATCCAGACTTGGAGCCAACCTGTTTGAACCACTACACCCTGCGGAACTTCTACACTATATACAGAGCAGACTATGGACCTTTGAGGCACCTTGCCTATCTTGGCTTTGTGAACTGGTGCTGGGGCTACTTGGGAAGGACTGTTAGGGTGGTAATCCCGT

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641298.1 True 610 lncRNA 0.45 3 989851 991035
XR_005641299.1 False 498 lncRNA 0.48 4 989851 991035

Neighbor

gene id symbol gene type direction distance location
LOC120571318 NA coding downstream 37548 902347 ~ 952303 (-)
LOC120571420 NA coding downstream 39398 940184 ~ 950453 (-)
LOC120549306 NA coding downstream 200784 786680 ~ 789067 (-)
LOC120573127 NA coding downstream 211184 766889 ~ 778667 (-)
plekhg2 plekhg2,LOC103150908 coding downstream 276156 473553 ~ 713695 (-)
LOC120570742 NA coding upstream 22185 1013220 ~ 1353897 (-)
LOC120572169 NA coding upstream 106302 1097337 ~ 1128067 (-)
LOC120544494 NA coding upstream 158751 1149786 ~ 1154041 (-)
LOC120544505 NA coding upstream 215637 1206672 ~ 1220544 (-)
LOC120544512 NA coding upstream 374596 1365631 ~ 1368320 (-)
G13576 NA non-coding downstream 107839 877227 ~ 882012 (-)
G13235 NA non-coding downstream 223862 765748 ~ 765989 (-)
G13233 NA non-coding downstream 229513 760079 ~ 760338 (-)
G13232 NA non-coding downstream 230133 758973 ~ 759718 (-)
G13230 NA non-coding downstream 255488 733968 ~ 734363 (-)
G13621 NA non-coding upstream 35003 1026038 ~ 1026411 (-)
G13664 NA non-coding upstream 270999 1262034 ~ 1298976 (-)
G13654 NA non-coding upstream 338664 1329699 ~ 1480649 (-)
G13688 NA non-coding upstream 422274 1413309 ~ 1464806 (-)
LOC120571736 NA non-coding upstream 693947 1684982 ~ 1694684 (-)
LOC120571545 NA other downstream 12113 969648 ~ 977738 (-)
si:ch211-137a8.2 NA other downstream 239348 740452 ~ 750503 (-)
G13228 NA other downstream 253309 733268 ~ 736542 (-)
G13195 triap1 other downstream 602467 386401 ~ 387384 (-)
supt5h supt5h other downstream 605663 310607 ~ 384188 (-)
G13587 NA other upstream 136856 1127891 ~ 1197686 (-)
LOC120571038 NA other upstream 175563 1166598 ~ 1197743 (-)
G13651 NA other upstream 311861 1302896 ~ 1381721 (-)
G13995 iws1 other upstream 1990026 2981061 ~ 2984498 (-)
LOC120570817 NA other upstream 2065694 3056729 ~ 3228824 (-)

Expression


Co-expression Network