LOC120572352


Basic Information

Item Value
gene id LOC120572352
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 11484612 ~ 11486070 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641426.1
GTTTCCCTGGACACACAAAAAGGTCCCGCAATAAAAGATATACTGACCCTTTACCACAAGCATCAATCAAGTCTAAGTGCTGGCTGAAGTTCACGCAGAACCAGAGACACTCTCCTCCACCTCTGGGAAAACAAGTGCTACACTCTGCCTACACTTCTCCGCTTGCTTTGTTCTGTTTGCTTGTCCAGCTGCAGCCACAGAGGGCCTGGATGTCTGCATCGTCCCCCTGAGCCGGCTGCCTGAAGCACAATACTCAGGGCCCACAATCACTTCATGCTCCCCAAACCCGTTAATACAGTTCCTCACTTGAGATTGAGTTAACACCTCAACTCAGGCTCTCTTTTTCCCAAATTTGACTCTGTATTTACAAGGCATTGCTGTGGTTTGCTGTAACTGAATGAATAACTAATGGATGTGAACTGACAATTAAAGCGTTCCTACTGTCTGCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641426.1 True 452 lncRNA 0.47 2 11484612 11486070

Neighbor

gene id symbol gene type direction distance location
LOC120551226 NA coding upstream 505183 10977205 ~ 10979429 (+)
LOC120551211 NA coding upstream 1020259 10455757 ~ 10464353 (+)
LOC120547173 NA coding upstream 1039123 10434485 ~ 10445489 (+)
LOC120548947 LOC103372137,LOC102304476 coding upstream 1059842 10405189 ~ 10424770 (+)
LOC120550666 LOC105915347 coding upstream 1107801 10359389 ~ 10376811 (+)
LOC120553334 NA coding downstream 49715 11535785 ~ 11540819 (+)
rps3 rps3,LOC102795110 coding downstream 68582 11554652 ~ 11562928 (+)
LOC120554434 NA coding downstream 70237 11556307 ~ 11556455 (+)
LOC120554442 NA coding downstream 71382 11557452 ~ 11557600 (+)
LOC120554427 NA coding downstream 74321 11560391 ~ 11560539 (+)
LOC120552116 NA non-coding upstream 42353 11427476 ~ 11442259 (+)
G16192 NA non-coding upstream 65731 11418614 ~ 11418881 (+)
G16190 NA non-coding upstream 138256 11346015 ~ 11346356 (+)
G16185 NA non-coding upstream 179101 11305281 ~ 11305511 (+)
G16183 NA non-coding upstream 187025 11297174 ~ 11297587 (+)
G16207 NA non-coding downstream 49018 11535088 ~ 11535301 (+)
G16229 NA non-coding downstream 203150 11689220 ~ 11771683 (+)
G16235 NA non-coding downstream 248328 11734398 ~ 11752981 (+)
G16237 NA non-coding downstream 268304 11754374 ~ 11812385 (+)
G16250 NA non-coding downstream 332810 11818880 ~ 11819272 (+)
zgc:101731 LOC106580895,LOC100194580,LOC103372138 other upstream 979274 10388232 ~ 10505338 (+)
G15712 NA other upstream 1481017 10002250 ~ 10003595 (+)
LOC120551195 NA other upstream 1481240 9866710 ~ 10003372 (+)
G15642 NA other upstream 1816133 9645137 ~ 9668479 (+)
LOC120551159 fam13c other upstream 1831781 9631391 ~ 9652831 (+)
G16267 NA other downstream 408434 11894504 ~ 11900873 (+)
G16467 clns1a,LOC102781126 other downstream 909925 12395995 ~ 12409274 (+)
LOC120552034 LOC104947607 other downstream 956060 12442130 ~ 12456583 (+)
LOC120554522 NA other downstream 1144604 12630674 ~ 12630864 (+)
G16590 actn4,LOC102210441 other downstream 1382760 12868830 ~ 12922469 (+)

Expression


Co-expression Network