LOC120572359


Basic Information

Item Value
gene id LOC120572359
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 22794426 ~ 22795639 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641431.1
AATTGGCTCCAAACATTTGTGGTGCCACAAATCCCCCATCCACAATTGATGATACTGAAGAGCTGACCACTGAGAGCAAGTGCATCCATACAGCTGTCAGCCACCCAAATCAGACCAGTCCAGAGCTCGGCCCTCTCACCAAGGCCCTTGATGACAAATTGGCTCCAAACATTTGTGGTGCCACAAATCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641431.1 True 193 lncRNA 0.50 3 22794426 22795639

Neighbor

gene id symbol gene type direction distance location
smtla NA coding downstream 441844 22347311 ~ 22352582 (-)
fli1 fli1,LOC106612965,LOC103145351,LOC106905187 coding downstream 560647 22200134 ~ 22233779 (-)
kcnj5 kcnj5 coding downstream 614765 22151337 ~ 22179661 (-)
srpra srpra coding downstream 740826 22044181 ~ 22053600 (-)
siae NA coding downstream 999482 21787540 ~ 21794944 (-)
barx2 barx2 coding upstream 65312 22860951 ~ 22871590 (-)
rbm7 rbm7,LOC104959492 coding upstream 79426 22875065 ~ 22882453 (-)
LOC120546095 NA coding upstream 363657 23159296 ~ 23162078 (-)
lbhl LOC102301737,LOC102196385,LOC100690809,LOC103154600,LOC108238121,LOC106945137 coding upstream 366563 23162202 ~ 23169207 (-)
cfap45 NA coding upstream 482963 23278602 ~ 23283802 (-)
G18837 NA non-coding downstream 14649 22777736 ~ 22779777 (-)
LOC120548681 NA non-coding downstream 158016 22635577 ~ 22636410 (-)
G18810 NA non-coding downstream 361464 22432553 ~ 22432962 (-)
G18803 NA non-coding downstream 429931 22364271 ~ 22364495 (-)
G18795 NA non-coding downstream 508217 22283003 ~ 22286209 (-)
G18841 NA non-coding upstream 20142 22815781 ~ 22815980 (-)
G18868 NA non-coding upstream 249110 23044749 ~ 23120934 (-)
G18883 NA non-coding upstream 342011 23137650 ~ 23138259 (-)
G18896 NA non-coding upstream 360302 23155941 ~ 23156504 (-)
G18905 NA non-coding upstream 379825 23175464 ~ 23175714 (-)
LOC120551419 LOC100709410,LOC102313657,LOC102784399,LOC102206705,LOC101487802,LOC104941978 other downstream 787251 21983302 ~ 22007175 (-)
gdpd5b gdpd5,LOC103357216 other downstream 1084063 21664076 ~ 21710363 (-)
LOC120572205 NA other downstream 1179180 21610814 ~ 21615246 (-)
slc6a4a slc6a4,LOC103359260,LOC108228506 other downstream 1532503 21237188 ~ 21261923 (-)
si:ch1073-340i21.1 NA other downstream 1697225 21094177 ~ 21097201 (-)
G18885 gramd1b other upstream 343574 23139213 ~ 23148515 (-)
G18948 LOC103474743 other upstream 450964 23246603 ~ 23252420 (-)
LOC120574680 NA other upstream 657908 23453547 ~ 23461044 (-)
atm atm,LOC102794456 other upstream 933849 23729488 ~ 23758826 (-)
slc33a1 slc33a1 other upstream 1006876 23802515 ~ 23809452 (-)

Expression


Co-expression Network