trnah-gug_4


Basic Information

Item Value
gene id trnah-gug_4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 44925487 ~ 44925558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_134
GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGTCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_134 True 72 tRNA 0.55 1 44925487 44925558

Neighbor

gene id symbol gene type direction distance location
trnar-acg_8 NA coding downstream 227 44925188 ~ 44925260 (-)
trnar-acg_7 NA coding downstream 2874 44922541 ~ 44922613 (-)
trnah-gug_3 NA coding downstream 3901 44921515 ~ 44921586 (-)
trnar-acg_6 NA coding downstream 5542 44919873 ~ 44919945 (-)
trnar-acg_5 NA coding downstream 6880 44918535 ~ 44918607 (-)
trnah-aug NA coding upstream 529 44926087 ~ 44926159 (-)
trnah-gug_5 NA coding upstream 827 44926385 ~ 44926456 (-)
phf12b phf12 coding upstream 42640 44968198 ~ 44986626 (-)
sez6b NA coding upstream 62405 44987963 ~ 45315867 (-)
myo18ab myo18a,LOC101474105 coding upstream 569979 45495537 ~ 45664024 (-)
LOC120549064 NA non-coding downstream 41149 44880670 ~ 44884338 (-)
LOC120549067 NA non-coding downstream 44978 44866130 ~ 44880509 (-)
G23911 NA non-coding downstream 109111 44812153 ~ 44816376 (-)
G23912 NA non-coding downstream 119448 44805798 ~ 44806039 (-)
G23906 NA non-coding downstream 151048 44774205 ~ 44774439 (-)
G23949 NA non-coding upstream 40181 44965739 ~ 44965970 (-)
G23964 NA non-coding upstream 73419 44998977 ~ 44999217 (-)
G23977 NA non-coding upstream 77876 45003434 ~ 45005501 (-)
G23986 NA non-coding upstream 393049 45318607 ~ 45318882 (-)
G23990 NA non-coding upstream 405174 45330732 ~ 45330998 (-)
mrps23 mrps23 other downstream 100494 44816628 ~ 44824993 (-)
smco4 NA other downstream 1136052 43770066 ~ 43789435 (-)
LOC120553425 NA other downstream 1208746 43700971 ~ 43716741 (-)
LOC120574039 nlk,nlk2 other downstream 1578814 43236682 ~ 43346673 (-)
cntn5 NA other downstream 2758450 42029673 ~ 42167037 (-)
bet1l bet1l other upstream 2209296 47134854 ~ 47142596 (-)
dhx34 dhx34,LOC102778731 other upstream 2369996 47295554 ~ 47325453 (-)
nectin1b nectin1,LOC102782356 other upstream 3231795 48157353 ~ 48398620 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnah-gug-334 NA coding NW_023494142.1 JAAXML020000621.1 56556 ~ 56627 (-)