trnah-gug_5


Basic Information

Item Value
gene id trnah-gug_5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 44926385 ~ 44926456 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_136
GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGTCGCAGCAACCCTGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_136 True 72 tRNA 0.53 1 44926385 44926456

Neighbor

gene id symbol gene type direction distance location
trnah-aug NA coding downstream 226 44926087 ~ 44926159 (-)
trnah-gug_4 NA coding downstream 827 44925487 ~ 44925558 (-)
trnar-acg_8 NA coding downstream 1125 44925188 ~ 44925260 (-)
trnar-acg_7 NA coding downstream 3772 44922541 ~ 44922613 (-)
trnah-gug_3 NA coding downstream 4799 44921515 ~ 44921586 (-)
phf12b phf12 coding upstream 41742 44968198 ~ 44986626 (-)
sez6b NA coding upstream 61507 44987963 ~ 45315867 (-)
myo18ab myo18a,LOC101474105 coding upstream 569081 45495537 ~ 45664024 (-)
LOC120549281 NA coding upstream 738924 45665380 ~ 45681164 (-)
LOC120548432 NA coding upstream 768746 45695202 ~ 45767319 (-)
LOC120549064 NA non-coding downstream 42047 44880670 ~ 44884338 (-)
LOC120549067 NA non-coding downstream 45876 44866130 ~ 44880509 (-)
G23911 NA non-coding downstream 110009 44812153 ~ 44816376 (-)
G23912 NA non-coding downstream 120346 44805798 ~ 44806039 (-)
G23906 NA non-coding downstream 151946 44774205 ~ 44774439 (-)
G23949 NA non-coding upstream 39283 44965739 ~ 44965970 (-)
G23964 NA non-coding upstream 72521 44998977 ~ 44999217 (-)
G23977 NA non-coding upstream 76978 45003434 ~ 45005501 (-)
G23986 NA non-coding upstream 392151 45318607 ~ 45318882 (-)
G23990 NA non-coding upstream 404276 45330732 ~ 45330998 (-)
mrps23 mrps23 other downstream 101392 44816628 ~ 44824993 (-)
smco4 NA other downstream 1136950 43770066 ~ 43789435 (-)
LOC120553425 NA other downstream 1209644 43700971 ~ 43716741 (-)
LOC120574039 nlk,nlk2 other downstream 1579712 43236682 ~ 43346673 (-)
cntn5 NA other downstream 2759348 42029673 ~ 42167037 (-)
bet1l bet1l other upstream 2208398 47134854 ~ 47142596 (-)
dhx34 dhx34,LOC102778731 other upstream 2369098 47295554 ~ 47325453 (-)
nectin1b nectin1,LOC102782356 other upstream 3230897 48157353 ~ 48398620 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnah-gug-294 NA coding NW_023494118.1 JAAXML020000421.1 37753 ~ 37824 (+)