trnar-ucu_6


Basic Information

Item Value
gene id trnar-ucu_6
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 649640 ~ 649731 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_78
GGCTCTGTGGCGCAATGGATAGCGCATTGGACTTCTAAttcaaaggttgtgggttcgagtcCCACCAGAGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_78 True 73 tRNA 0.47 2 649640 649731

Neighbor

gene id symbol gene type direction distance location
gpr171 NA coding upstream 79144 553166 ~ 570496 (+)
shkbp1 shkbp1,LOC102789242 coding downstream 168394 818125 ~ 842046 (+)
LOC120570981 LOC101882356 coding downstream 335877 985608 ~ 990071 (+)
LOC120571197 NA coding downstream 1447870 2097601 ~ 2116993 (+)
LOC120571101 NA coding downstream 1474628 2124359 ~ 2541178 (+)
LOC120571617 NA coding downstream 1488278 2138009 ~ 2138881 (+)
trnar-ucu_5 NA non-coding upstream 1069 648480 ~ 648571 (+)
trnar-ucu_4 NA non-coding upstream 2493 647056 ~ 647147 (+)
trnar-ucu_3 NA non-coding upstream 5501 644048 ~ 644139 (+)
trnar-ucu_2 NA non-coding upstream 7047 642502 ~ 642593 (+)
trnar-ucu_1 NA non-coding upstream 7877 641672 ~ 641763 (+)
trnar-ucu_9 NA non-coding downstream 24551 674282 ~ 674373 (+)
G13191 NA non-coding downstream 55767 705498 ~ 713506 (+)
G13193 NA non-coding downstream 69635 719366 ~ 719714 (+)
G13284 NA non-coding downstream 343381 993112 ~ 1035042 (+)
G13301 NA non-coding downstream 402346 1052077 ~ 1068893 (+)
triap1 triap1 other upstream 203087 386373 ~ 446553 (+)
G13106 NA other upstream 285690 309204 ~ 363950 (+)
LOC120553352 LOC107379863,LOC103373565,LOC102295163 other upstream 474491 158592 ~ 175149 (+)
G13234 NA other downstream 115808 765539 ~ 765977 (+)
G13262 NA other downstream 246467 896198 ~ 1281593 (+)
G13286 NA other downstream 348135 997866 ~ 998979 (+)
G13390 NA other downstream 902133 1551864 ~ 1559663 (+)
LOC120571187 NA other downstream 1613679 2263410 ~ 2294888 (+)

Expression


Co-expression Network