trnal-cag


Basic Information

Item Value
gene id trnal-cag
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 7411830 ~ 7411912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_83
GTCAGGATGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCTCTGGAGgcgtgggttcgaatcccactTCTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_83 True 83 tRNA 0.49 1 7411830 7411912

Neighbor

gene id symbol gene type direction distance location
LOC120545619 abcf3 coding upstream 15196 7365796 ~ 7396634 (+)
or55e1 LOC104939064 coding upstream 470396 6935046 ~ 6941434 (+)
LOC120543617 NA coding upstream 482245 6913684 ~ 6929585 (+)
LOC120545568 LOC102303044,LOC101479096 coding upstream 500340 6910543 ~ 6911490 (+)
LOC120545541 NA coding upstream 512248 6898638 ~ 6899582 (+)
LOC120543955 NA coding downstream 19031 7430943 ~ 7440997 (+)
ece2b LOC103361209,LOC101485402 coding downstream 123187 7535099 ~ 7570718 (+)
ano7 ano7,LOC103361833,LOC108228741 coding downstream 161812 7573724 ~ 7603726 (+)
LOC120551040 NA coding downstream 200336 7612248 ~ 7640011 (+)
eif4h eif4h,LOC102797691 coding downstream 230642 7642554 ~ 7665150 (+)
G15174 NA non-coding upstream 9054 7400765 ~ 7402776 (+)
G15171 NA non-coding upstream 19520 7391413 ~ 7392310 (+)
LOC120544109 NA non-coding upstream 23148 7382638 ~ 7388682 (+)
G15156 NA non-coding upstream 50621 7326575 ~ 7361209 (+)
G15162 lrch3 non-coding upstream 55273 7354998 ~ 7356557 (+)
G15179 NA non-coding downstream 13528 7425440 ~ 7459538 (+)
G15236 NA non-coding downstream 83148 7495060 ~ 7541926 (+)
G15243 NA non-coding downstream 255230 7667142 ~ 7745991 (+)
G15262 NA non-coding downstream 367345 7779257 ~ 7800890 (+)
G15267 NA non-coding downstream 371856 7783768 ~ 7839409 (+)
G15173 LOC102077075 other upstream 12689 7398101 ~ 7399141 (+)
G15019 NA other upstream 422434 6972845 ~ 6989396 (+)
spcs2 spcs2 other upstream 994321 6407985 ~ 6417509 (+)
rnf169 NA other upstream 1007405 6393062 ~ 6404425 (+)
G14344 NA other upstream 1883211 5510757 ~ 5528619 (+)
G15234 NA other downstream 79453 7491365 ~ 7492057 (+)
rffl rffl other downstream 394897 7806809 ~ 7853429 (+)
LOC120543808 NA other downstream 414698 7826610 ~ 7828087 (+)
LOC120543711 LOC102298536 other downstream 446141 7858053 ~ 7892473 (+)
G15415 NA other downstream 758784 8170696 ~ 8172491 (+)

Expression


Co-expression Network