trnam-cau_1


Basic Information

Item Value
gene id trnam-cau_1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 28066325 ~ 28066397 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_98
GCCTCGTTGGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAGCCTCACACGGGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_98 True 73 tRNA 0.59 1 28066325 28066397

Neighbor

gene id symbol gene type direction distance location
p2ry2.1 p2ry2 coding downstream 20240 28041449 ~ 28046085 (-)
kbtbd3 kbtbd3 coding downstream 185511 27872415 ~ 27880814 (-)
alkbh8 alkbh8 coding downstream 201802 27850024 ~ 27864523 (-)
gucy1a2 gucy1a2,LOC102775648 coding downstream 246212 27771968 ~ 27820113 (-)
msantd4 msantd4 coding downstream 334821 27725434 ~ 27731504 (-)
yif1b yif1b coding upstream 75146 28141543 ~ 28147451 (-)
trnar-acg NA coding upstream 84183 28150580 ~ 28150652 (-)
bloc1s3 bloc1s3 coding upstream 194204 28260601 ~ 28262791 (-)
zgc:114130 NA coding upstream 205281 28271678 ~ 28276819 (-)
zgc:162730 LOC103363970,LOC104955298,LOC104928501 coding upstream 236638 28303035 ~ 28306177 (-)
G20056 NA non-coding downstream 58851 28007041 ~ 28007474 (-)
G20049 NA non-coding downstream 59748 27984269 ~ 28006577 (-)
G20019 NA non-coding downstream 152767 27868594 ~ 27913558 (-)
G20012 NA non-coding downstream 294428 27769501 ~ 27771897 (-)
G19967 NA non-coding downstream 320751 27745285 ~ 27745574 (-)
G20090 NA non-coding upstream 43365 28109762 ~ 28114304 (-)
G20091 NA non-coding upstream 49503 28115900 ~ 28116767 (-)
G20092 NA non-coding upstream 51321 28117718 ~ 28118289 (-)
G20093 NA non-coding upstream 52812 28119209 ~ 28120499 (-)
G20094 NA non-coding upstream 54318 28120715 ~ 28124728 (-)
cwf19l2 cwf19l2 other downstream 218777 27824605 ~ 27847548 (-)
G19840 NA other downstream 977261 27088606 ~ 27089064 (-)
cul3b cul3,LOC104924156,LOC100710156,LOC107099750,LOC108240497,LOC104940878,LOC103474461,LOC108428259,LOC102194569,LOC101170875 other downstream 1596429 26451380 ~ 26469896 (-)
LOC120570434 fam124b other downstream 1620390 26434281 ~ 26445935 (-)
LOC120570356 ypelc,ypel2,LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438,LOC107599611,LOC101078269,LOC104940871 other downstream 1731606 26307064 ~ 26334719 (-)
G20417 scarf1 other upstream 1380773 29447170 ~ 29448655 (-)
im:7138535 NA other upstream 1901032 29967429 ~ 29972350 (-)
rnf26 rnf26 other upstream 2021338 30087735 ~ 30091711 (-)
cbl cbl other upstream 2088496 30154893 ~ 30198071 (-)
arhgef12a arhgef12 other upstream 2502476 30568873 ~ 30618434 (-)

Expression


Co-expression Network