G134622


Basic Information

Item Value
gene id G134622
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 18291783 ~ 18294923 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU181122
GGTAATGATGGTGATGAGGAGGAGTTAGCTACTGCAGATGTTTGTTCACTGGACTAAATTAACCAGCTAAGGTTGGTCCATCGAATCTGAAACACGGCACGTGGGTTGCTGCTTGCTCCATTGGGGGAAAAAGACGGCACTACGAGGATTATCCCAGTGAAAAATTACTCCTCAGATTCAACAATGGCGGTTTAAAACGGGTATAGTCTCCGCCTTCCAGTTACACTCCTACCTCCCTTTCTCTTCTCCTAGTCTACACCCATTTTGTCCAATATTTTATGttgctctcttctttctcttcctcgTCTCATTGGCTTTGACCTGGTTCTGCCAGGAATCAGTCTTCTTTATCACTCCTCGTTGCTTATTTGTTACTTCCACTGAGTTGAGGTTGAAGACTGTAAATCGCTCAAAATGGTTGCTGAGGTAGACTCAGGGTCTCAGGGCAGCGGT
>TU181123
GGTAATGATGGTGATGAGGAGGAGTTAGCTACTGCAGATGTTTGTTCACTGGACTAAATTAACCAGCTAAGGTTGGTCCATCGAATCTGAAACACGGCACGTGGGTTGCTGCTTGCTCCATTGGGGGAAAAAGACGGCACTACGAGGATTATCCCAGTGAAAAATTACTCCTCAGATTCAACAATGGCGGTTTAAAACGGGAATCAGTCTTCTTTATCACTCCTCGTTGCTTATTTGTTACTTCCACTGAGTTGAGGTTGAAGACTGTAAATCGCTCAAAATGGTTGCTGAGGTAGACTCAGGGTCTCAGGGCAGCGGT
>TU181124
GCTAATTTCAAAACGCTGGCTACGGCCCTGTATACAGTCAATGTATTAATGTGTGCGCAGTACGTGGCTGGCTGTCTCTGTTGAGGGATGGAAGAAACGTCACAATCGCTGTCATCTTTCTGTCAGGGGGCGCGGCTAACCATCCTTTGGCGGTAATGATGGTGATGAGGAGGAGTTAGCTACTGCAGATGTTTGTTCACTGGACTAAATTAACCAGCTAAGGTTGGTCCATCGAATCTGAAACACGGCACGTGGGTTGCTGCTTGCTCCATTGGGGGAAAAAGACGGCACTACGAGGATTATCCCAGTGAAAAATTACTCCTCAGATTCAACAATGGCGGTTTAAAACGGGTATAGTCTCCGCCTTCCAGTTACACTCCTACCTCCCTTTCTCTTCTCCTAGTCTACACCCATTTTGTCCAATATTTTATGttgctctcttctttctcttcctcgTCTCATTGGCTTTGACCTGGTTCTGCCAGGAATCAGTCTTCTTTATCACTCCTCGTTGCTTATTTGTTACTTCCACTGAGTTGAGGTTGAAGACTGTAAATCGCTCAAAATGGTTGCTGAGGTAGACTCAGGGTCTCAGGGCAGCGGT

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko04218 Cellular senescence

RNA

RNA id representative length rna type GC content exon number start site end site
TU181122 False 453 lncRNA 0.46 2 18291783 18294772
TU181123 False 319 lncRNA 0.46 3 18291783 18294772
TU181124 True 604 lncRNA 0.47 2 18291783 18294923

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-120h9.1 LOC103376020,LOC104947060,LOC101167380 coding downstream 42 18277779 ~ 18291741 (-)
ripor2 fam65b coding downstream 30520 18200876 ~ 18261263 (-)
c13h6orf62 clg22h6orf62,LOC108240366,LOC102228185,LOC101464686,LOC104924567,LOC107087843,LOC103135136,LOC106515831,LOC104947055 coding downstream 97756 18191093 ~ 18194027 (-)
tdp2b tdp2,LOC102195294 coding downstream 101995 18186218 ~ 18189788 (-)
necab1 necab1 coding downstream 130111 18116387 ~ 18161672 (-)
hey1 hey1,LOC103376003 coding upstream 14156 18309079 ~ 18312003 (-)
zbtb10 zbtb10 coding upstream 72095 18367018 ~ 18383413 (-)
znf704 znf704 coding upstream 121698 18416621 ~ 18464516 (-)
pag1 pag1 coding upstream 170653 18465576 ~ 18515333 (-)
gmpr gmpr coding upstream 382996 18677919 ~ 18687547 (-)
G134546 NA non-coding downstream 91723 18197888 ~ 18200060 (-)
G134544 NA non-coding downstream 96710 18194085 ~ 18195073 (-)
LOC120571945 NA non-coding downstream 135660 18152470 ~ 18156123 (-)
G134535 NA non-coding downstream 177351 18114205 ~ 18114432 (-)
G134528 NA non-coding downstream 215352 18075047 ~ 18076431 (-)
G134623 NA non-coding upstream 2464 18297387 ~ 18303527 (-)
G134632 NA non-coding upstream 37699 18332622 ~ 18332932 (-)
G134629 NA non-coding upstream 115024 18409947 ~ 18412997 (-)
G134652 NA non-coding upstream 165223 18460146 ~ 18470374 (-)
G134656 NA non-coding upstream 229283 18524206 ~ 18527278 (-)
rbm24a rbm24 other downstream 274755 18006128 ~ 18017028 (-)
si:ch211-199g17.9 LOC104947036 other downstream 347309 17938792 ~ 17944474 (-)
LOC120572101 NA other downstream 349683 17941968 ~ 17942100 (-)
snrpd1 snrpd1,LOC107655105,LOC107559756 other downstream 398354 17886458 ~ 17893429 (-)
si:ch211-215i13.3 baalc,LOC103376370,LOC104947028,LOC102079175,LOC102207491,LOC101482105,LOC103394441 other downstream 449549 17837572 ~ 17842234 (-)
G134893 LOC104963956 other upstream 1169422 19464345 ~ 19473111 (-)
tshz1 LOC103358534 other upstream 1229255 19524178 ~ 19690006 (-)
csmd3b LOC102796854,LOC102292540,LOC101468178 other upstream 1398132 19693055 ~ 20076540 (-)
G134942 NA other upstream 1943461 20238384 ~ 20239260 (-)
LOC120571828 NA other upstream 2653175 20948098 ~ 20953106 (-)

Expression


Co-expression Network