G134893 (LOC104963956)


Basic Information

Item Value
gene id G134893
gene name LOC104963956
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 19464345 ~ 19473111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU181489
ATCTACATTGaccaactttatttgtatattgtAACAGTCAGACAAAACGTGTAACTGGTGAAAATAGAAATTCTGATACCAACATAATTATTAACAATGTTAAAACTGTTTTGTCTACATAGTCACAAAAATGAACCCAGTGAGAGCTCAAATTTAAGCTTTAGGTTTGCATAAAAGTTCAGGCTTGCATAAACATCGCTGTCTCACTGTTTCCTGTCACTCCTCTGCTAAGCTGTCTCTTTACAGACAGCTCTTAGATCACAGGCTCAATGCAGGAGCATCACTCCTTACTGACCCTGCACTCTGACCTCAAGTGTGTCactgatttcttttttctttttttttttacattttctgttgttACTACAAATATCAAGTACTTAGGAGTGTTACAATTCAATTCTTATCAAACAAAAATaccattaaataaaacaatcattTACAATATTTATCAAAAAACAGGTTTTCCGCACCGATCAAAGTcaataatcaaataataaatTATGTATTCTCAAGATCTCCCAAGAATCCATAAGTTGATGGCTTTTTATCAAATGCATAGACTACTTCTCTATGGGAGATGAATACACTGAATCGGAACTAAAATATAGACATGCTAAACAAATCtgcaaacagaaaacacacaataacaaatttGAGAACGAGGTgaatttcaaaaacaaaatattctgcaATCTCTTTAGTAGCTTGACTGGCAGATGTAAGTCAGGGCCACGTCAGTAGAAATTGTTATCGCTACAGTTTCTACATCTAAAAATCACAGCATTAAATTGCTACATCACTAGCACAATGTGAAATGAGTGCAGATGTTTACTTTATATTTCtgatatgagaaaaaaaaaaggacaaattaTAGCATTTAAATTTCAAAATTGGAATCATAAAACGGGACACCACATTTCCTTGTAAATCGGCACATTTGTACACACACGTTTGACAGACTGGCTACAACTATGGCCACCAGTTTAGGTATATTTCTGTGGTTTTCTCACATGAATTGATTATCCATTCTGGATCTTAGGTTTGGCGGTAGCTATGGATTTGCCATAGAGTGATAAAGACCATGGTGCTGCTCCCGCTGTTTGACATGGATATAAAACCGGTCAAAAACACAAGGAGTGGTGTAGTGGTATAATCTATAGAAGCTGTAAACTGGAACTGGTTAGTTAACTTGGTCACTAGAACTGCAGATTGTAGCAGAAGACAACTGATGATGCCCTTCAGCATGTATGTGGGTATATTTGAGTATATACTAATCAAGAGTGAATTTACATGAAGAAAATCCAATTTCCTTGAGAtgttcattttctgtcaaaaGTATGACTATGTTTTGTAGTATACCAAGTCTCTGTGTAGCAAACGTAATTGAAATATTTCTGCCAGTTATTTGAGTTGAAGTCAATCCACAACTTGTGATTGTGGGCTGAAGAGCTTTTAGATCACAACATTTTCTCACAACTGTTTTCTTAATGTGTGTGGGGTGATGAGATAATAGTGCTAAAGCCTGATTTAGCTCTAATTAAGCCACCCCATAGTGACTTACAGAGGGATCATTGTTCATTTGTAGTTGAAAACGGTGAAAGCTAACTTTTGCTAGACTTTGCTTTTGATATTACCGGCACTATACTTGTCATAGCATAGTGATGGATGACAACTGTCTACTGTAAGATCAGGATTTTAATTATTATGTGAATATGGGCTTAAAACCGAAAAGTGACAACAAGCTGCAATTTATATTTAATTGCTCCACTGCATATTCTGTCTATATCTATGTTGAGATGATCAAATACAGTACTAACCTAAAACCCAAAGCGGACATTTAATAAGCTTGTAGattacataaaaacaacaaactgaAACTTATATAGAGAGGTAAAAGTGAAGTAAAATGTTCAGGTCACAGTTTACATCTTTGAAGTACTTCTAAATGTTTCTAGTGGCATCCTGGTTTTTCATGTTTGATGGTGAAtatggaggggggagggggggttgtaTTGTTTTGCTAGATCTCACCAGCtagagcacttttttttttttttttacacaaaaccAGCAGTTATCTCCTGCGCTTTAGCCAATATGTCCTCTTTATCCTTTAGCAAATGTAGCTTCTCATTTCAATTCCACCGACATCCCCCctaaatgtttatgtttacaaaAAGCTCAAACAGGTTTACCTCATTTCCATTGAACATATCTTCATGTGTGTTTTGGTAACTAACATATCTACACTCTTAACAAACAAAAACCATGCGTAACACTTCAAATTAAATCATATTACAAAATAACAGTCCACCTCATTGCTTTGCATATAATGTGCATTATCCAGTGCCTCTGTCCTTTAGGAGTTATGGCTGGTTCCTTTTTAAGAACAGCAGGCCTCTTTGATCAGCAGTATCATGCAGGCTGGAAGCCAACAGGAACACAATGTCACTTCACGTTCCTTTGTGAAGAGACCCTGAGGAGGAAGTGGAGCGGCTATTCACTTGTTTGGAAGCTTCAGAGGTGGGGTGGACTTCTTTTCCAAAATTTTCATTTAACTGCAacattgCTTGTGGATCAATCCTGGGATCAACAAACCCCCAGTGCTGGTAAAGAGCAGCCAGATCGTGGGGACTGTAGTTTTTCAGGAGACTCAAAATATCAATGTCCATTGGCATTTCTCctgttgattgattttttacCTGAGCAAAACGGAGTGGTTCTAAATATGCTTTGTGGCCCCACATGTTCATGGCAGCCCACAGATCAGGATCCTTAGGAACAGAAGAGGAGTCGCATGACAGCCTGCAGGGATGGGGTCTATCTGCAGAAGCGTTAGATGAAGTCCCGCCATGATTTCTGGCCAACATGAAACCTAAACCCTCCTGAGGAAAGTTTCCTTCCACTGCAGCTCTGTGGCTTCTGTGTTTAGGGCTGCTTGTAGGCTGGGAACTAGGGGCACTCTTGCTGTGCACAATACTGCTTGATGAAGTAGCTTGAGTGCTGGAGCTTTTACTTCCCCCCTTTTCTGCCTGGTTATGTTCAACAGACTTCTTCTGAGGTAGGCGTCCCATCCTCCCACTAGACTGTGTCCCATCTGAAGAACGTGAGTCCTTAGACTGATGCTTGGACTTAGGGACGATTGATTTGGTCTTGGGGGCTGAgtgcttgctgctgctgctgccgccagTTGTCAAAGCTGGAGGCTGTGTGCGTTGAGTTCTTGGAGCAGGTAAAGCAGGGCAGTCCTTGCCTTCGAGAAATGGTGGCGGCCCTGTGCGTCTCCACTGGGTAGCACCTGCCTTTAAAATCTTGGGGCTGTTAGTGCAGGGTGCCCACTTGGGTGCCATGGAGCTGCTGTTATCCACCCTGTGTGCAACCCGCTGGTGGATCCACAGTACTTCTGGGTAGTTGGTAGTGTGGGAGCAGTATGGGCACTGATGTCTCACCAGGCCCTCTGTCTTTATTGGATAATTTACAGTGCCGTCTCCTTCACTTATGGGTAATGAAGACAGATTAAGAAGACTATCAGCATCATCAGTAGTATGTCCCTGCCCTTTAAACTCAGTACCATTTGACTTCGTTTTAATGTTGGACTCTGCTGACCCCTGGTCAGGCGGACATGTGTAAGGATTCCAGAATGGCTGACTGAGCAATTCACTCCTGTTTCTGAGGTAGTCCATGTATCTTGAGGCCTTGGAACCACTTGGGTTAATGTTGTCCAAAATGGTGCTTTGTTTGCAGTAGGGACCCAGGAAGTCCTGGTGCTGCCTGTGCAGGTGAGACCTGAGTAGTGAGGCGTCGACAGTGTGGAAATCACAGTGCTCGCAGAAGTATGTTTTTTTTACCCTCCTGGTCTTGGCTCCTGGTGCTGTTGGTCTGTTTAGGTGTGAGGTGAACATCTTTGACTTTCTTAGTCTGCAGTGCCTCATAAAACGCATGGCCAAGTCCGTTCAACAAAATACGGTCTTtctgggaaatctttttgtcaACACCTTTAGTGTGAGTCAAGGTGTTTGATGTGTGATCAAGGCCTGTGTCACCCTTAATCTTCTTAATGTTGGAGCTGGAGGTGTGGATTtgcttcctcttcttctcctgcTTCAGGGGTACATACTCGCCCTTTTCTGTGTTATATGCCACCTCAGCATCTGCTAGCCTCTCCTCCCATCCCAGACATTTCTCTGTGGCCTCCACTAGTCGTCCTCTTGTGGCCAACTGCCACGCTTGGTAACTGCAAACTGGATCCAGCTCTGGAATTCGCCTGCCCAGGCTCTTTTCCTCAGGAGTTTCCCTTGGTCCAGCACATGTGAGGTTCAGGCTTTCCAAAAAATAACTCTTAGCAATGTGCAGCTCAGGGGCTTTAATGTCTTCCTGTGGTGGCTTTTGTGTCTGAGTGCGGCAGTGGTTCGGTTTATGTAGCTTTTCATGTATTCGTAATGTCTTGCGGTCATAGAAGAAGTTACCACAGCCAGCACAGAGCTCATAGAGGCACTCTTCATTTGTCAGCAATGCTGGGTCCTGAGGAACTCCATTGATGGTGGCAGGCAGCTCATTGCTTTTGCCACCTCTTAGCTGGGCTTTGACCCGGTGAATGCGCATATGACTTTGGAGGAACCATGCTTGGCGGAAACGGCGTCCGCAAATCCGGCAACCGTGATCCTGGGAGCTGCGGTGCCTTTTCATGTGAGATTTAAGGAGTAGGAGCTGAGGGAAAACCTGGCCACAAATGCTGCAGGTACAGGACCCATCATCAGCCCCATCACCGGCCTCAACACCATCTTTACTCTTAACTTTTTTCTTGGTTCCTTTCTTCTTCACTTTCCCGTTGACATTATGAACTTTGTCAGATGTGCTGACAATTTCAGGAGGGTCAGGTGTCTCAGCGTTATCTTTCTGCCCTTGatctctttccttctccttgTCACTGAGGTTATGGCTGAATAGGCCCAGTTTATGGCTTCGAATGTGGGCCTTCAGACTGCCCTTCTGAGCCGTTCTGTGGTCACAGTATGGACACTTGTACGGCTTCTCCCGTGTGTGTCTTCTCATGTGCTGCGACAAAGAGCTGAGAAGAGGAAAGCTGCGGCCACACACCCCACAGGTGTGGCCAGAAGTCacatcttcctctgtctctgccttTATATTAGCTGTGGCTTTTTTTGGTACATCCTCCTTCTCTTCTGTCTCCATTACTTTTCCTGGAGCACTGGTACGTCAAAAGCCACAGCTGTGTTATAAAATCCCCTAACTATGCAAAGTTTATCTTCCAAAAGTTAGTGAGTTCTCAGAAAAGGCATTTCACAGCTTTAGTGTCCATCCTGATTTTTGAAAAGATGTTCTTTTTCAGGTTGCATACTGTTT

Function

NR:

description
PREDICTED: zinc finger protein 516-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181489 True 5367 TUCP 0.43 4 19464345 19473111

Neighbor

gene id symbol gene type direction distance location
LOC120571723 LOC104931635,LOC103358537,LOC108239001,LOC104963954 coding downstream 19775 19441916 ~ 19444570 (-)
LOC120571929 LOC103371371 coding downstream 126601 19330509 ~ 19337744 (-)
LOC120571928 NA coding downstream 133834 19328008 ~ 19330511 (-)
LOC120571040 NA coding downstream 171209 19282804 ~ 19293136 (-)
grhl2b LOC103371453,LOC100712454,LOC102310407,LOC102790361 coding downstream 221442 19226503 ~ 19242903 (-)
LOC120571378 NA coding upstream 741386 20214497 ~ 20242113 (-)
trps1 trps1 coding upstream 779525 20252636 ~ 20370759 (-)
ptk2aa LOC103365438,LOC107096201,LOC101470500,LOC103394159,LOC103146869,LOC106958462 coding upstream 1076654 20549765 ~ 20621239 (-)
trnah-gug_14 NA coding upstream 1149678 20622789 ~ 20622860 (-)
trnah-gug_15 NA coding upstream 1150219 20623330 ~ 20623401 (-)
G134881 NA non-coding downstream 71859 19391746 ~ 19392486 (-)
G134873 NA non-coding downstream 95830 19368242 ~ 19368515 (-)
G134872 NA non-coding downstream 96620 19365519 ~ 19367725 (-)
G134871 NA non-coding downstream 98926 19365153 ~ 19365419 (-)
G134870 NA non-coding downstream 99334 19364608 ~ 19365011 (-)
G134943 NA non-coding upstream 774013 20247124 ~ 20247456 (-)
G134955 NA non-coding upstream 776905 20250016 ~ 20280200 (-)
G134994 NA non-coding upstream 1138135 20611246 ~ 20617383 (-)
G135029 slc45a4 non-coding upstream 1212522 20685633 ~ 20686886 (-)
G135030 NA non-coding upstream 1243017 20716128 ~ 20716480 (-)
rbm24a rbm24 other downstream 1447317 18006128 ~ 18017028 (-)
si:ch211-199g17.9 LOC104947036 other downstream 1519871 17938792 ~ 17944474 (-)
LOC120572101 NA other downstream 1522245 17941968 ~ 17942100 (-)
snrpd1 snrpd1,LOC107655105,LOC107559756 other downstream 1570916 17886458 ~ 17893429 (-)
si:ch211-215i13.3 baalc,LOC103376370,LOC104947028,LOC102079175,LOC102207491,LOC101482105,LOC103394441 other downstream 1622111 17837572 ~ 17842234 (-)
tshz1 LOC103358534 other upstream 51067 19524178 ~ 19690006 (-)
csmd3b LOC102796854,LOC102292540,LOC101468178 other upstream 219944 19693055 ~ 20076540 (-)
G134942 NA other upstream 765273 20238384 ~ 20239260 (-)
LOC120571828 NA other upstream 1474987 20948098 ~ 20953106 (-)
G135403 NA other upstream 2224309 21697420 ~ 21752377 (-)

Expression


Co-expression Network