LOC120571828


Basic Information

Item Value
gene id LOC120571828
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 20948098 ~ 20953106 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU181745
CCAATTAGCAGCTACCAGATGCAATCAATTAGCTTCCAACCAGTACTTATAGCACGGCAGGATGCTGCGTCTTTGTACAGGTCTCAGCAGCTGCAGGAGGGCTTTACGTGGATCCATGGCTGGTGTTAGGGTTGAGATGTTACTGGTGCTGACTGTGATGCTGCTGCTTGTTCCAGTAAAGGGATGGGAACATATCAATGGCACTCAACTTGTTAATTCTGACGAGTCGGGGCAATTGAATGACCCACAAAACGTTACAGATGACAGCAGCTACTTTGCCAGTGAAGAAGAATTTCCTGAGGATGTACTTTTTAAAGTTGGAGGTGCCTCCACTAGTGAAACTGTCAACCCTTTTGCTGACCATGGATTCCAGATAGACACAGTAGATGCCCCTTTGAGGAATTGGACCAGCCATAGTTCTTGTGTGTTAGAAGTGGTTTGTAGTGATGTTGGCTTCCAGATTACTCTCCTGACTGTTTCATTAAGTGAAATCACAATTTTGGACTTGGACTCAAAGGAATTATCTGTCATGGATGCTCCCAAATCTTGTGGCTATGAAGTGGATCCTTTCCAGAACACCTTGAGTGTACCCTTTACTGGCTGCAATGTGAAACATACTGATGGCTACAGCCTGCAGTTGTTGTATGTAGATAAGACCGGTCAGAGACAAGTTGCTACTGCATCTTGTGAGAAAAATCCAAAGTTTGGCCCTCGCTTCAATGGCAAAAACaggggccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>XM_039820921.1
CGTCTTTGTACAGGTCTCAGCAGCTGCAGGAGGGCTTTACGTGGATCCATGGCTGGTGTTAGGGTTGAGATGTTACTGGTGCTGACTGTGATGCTGCTGCTTGTTCCAGTAAAGGGATGGGAACATATCAATGGCACTCAACTTGTTAATTCTGACGAGTCGGGGCAATTGAATGACCCACAAAACGTTACAGATGACAGCAGCTACTTTGCCAGTGAAGAAGAATTTCCTGAGGATGTACTTTTTAAAGTTGGAGGTGCCTCCACTAGTGAAACTGTCAACCCTTTTGCTGACCATGGATTCCAGATAGACACAGTAGATGCCCCTTTGAGGAATTGGACCAGCCATAGTTCTTGTGTGTTAGAAGTGGTTTGTAGTGATGTTGGCTTCCAGATTACTCTCCTGACTGTTTCATTAAGTGAAATCACAATTTTGGACTTGGACTCAAAGGAATTATCTGTCATGGATGCTCCCAAATCTTGTGGCTATGAAGTGGATCCTTTCCAGAACACCTTGAGTGTACCCTTTACTGGCTGCAATGTGAAACATACTGATGGCTACAGCCTGCAGTTGTTGTATGTAGATAAGACCGGTCAGAGACAAGTTGCTACTGCATCTTGTGAGAAAAATCCAAAGTTTGGCCCTCGCTTCAATGGCAAAAACaggggccaaCTTCCCTTGGAGGAGCGGTTGACTTGTGGTTGTATAGGAATATCTGCCTCAGACTGTGAGGAGAGGGGATGCTGTGTGTCTTCTTCTGACTGTTACTACCCACTGGATGAGTGCACTGCAGGCAACTTTGTTTTTGCCATTCGCTTCAACTCTACATCCATCCCTTTGGACCCCACCAAGCTCATTATTCCCGGGAGTCCAAATTGTAAACCAGCCATTGTTAATGACAAGGTTGCCATCTTTAAGTTTAAAGTTACAGAATGTGGAGCTCGTGCTTTTGAAGTTGGTGAGACAACTATCTACCTGACTGAAGTGCAATCTGTTGTCCAAACTTGGAATCTCAAATATGGCATAATATCAAGAAGCGACTATTTCAAgtTCATGATTGAATGCCGCTACAGCAAATCACAGGCCAGTCCTCTGGAGCAACTGGCCCATGTTTCCTACATGGTCAAGACCCCGTGTTCCAGCTTGCCATTGTCTATTATCTCAGATGGCTTATATGGTGTTACACTAAGAATTGCTCAGGATGAGACTTATTCAAGCTACTTCCCTACTTACCATCAGCCCTTGAGAATGCTCCTTGGCAAGCCAGTGTATCTTGAACTGCTCCTGAAGTCTCCAAAACCAGATGCAGTACTTATTGTGAACTACTGTTTAGCTTACCCTCGCTCTGCAAAGAATGCTCTGGTGCTCATTTTTGAAGGGTGTGCCAATCCTCATGATCCAACTGTGTCTATACTTAAAGTCAGTGGCCTTCCCCAAAATCGTTACCAAAGGCGCTTTGTGGTCCAGGCTTTTCAGTTTATGGATCAAAAGACAAACCAGTACCTTGACGAAGAAATCTATTTTATGTGCTCTACAGAAGTTTGTCGGACAGACGAAAAGACTTGTAAAGAACGGTGTTTTGATGGAAAGGAATATTCCAGTGTTGGAGAGGATTCCTCAGAAGAAGAGACCTACTTACCACATGGGAGGGAACCATCTGATGGCCAGTCAACCTGTTGGGGACTGGGTAAACATTAGTGAAATGCTACTTGGACCTGAATACATAAGTGTTTGCGTGTACTTGAAATGTATGCAATAAAGTATATTGTGACCATGGTA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU181745 False 794 TUCP 0.42 4 20951559 20953106
XM_039820921.1 True 1779 mRNA 0.44 13 20948098 20953039

Neighbor

gene id symbol gene type direction distance location
LOC120571532 cndp2 coding downstream 1787 20935365 ~ 20946311 (-)
recql4 recql4,LOC102788509,LOC106588958,LOC106570431,LOC107589489 coding downstream 15742 20918466 ~ 20932356 (-)
scrt1a znf517,LOC104919571,LOC102799675,LOC107096205 coding downstream 91033 20845451 ~ 20857065 (-)
dgat1a dgat1,LOC103358573 coding downstream 177809 20745723 ~ 20770289 (-)
LOC120571827 LOC103358580,LOC101470211,LOC102193111,LOC102308378 coding downstream 213505 20731748 ~ 20734593 (-)
dus3l dus3l coding upstream 669 20953775 ~ 20959470 (-)
LOC120570709 mterf1 coding upstream 12760 20965866 ~ 20968081 (-)
LOC120571654 LOC104962954,LOC107394621 coding upstream 89317 21042423 ~ 21048367 (-)
krit1 krit1 coding upstream 96231 21049337 ~ 21056229 (-)
rpz2 LOC104964994,LOC100701575 coding upstream 104319 21057425 ~ 21060060 (-)
G135058 NA non-coding downstream 105575 20842190 ~ 20842523 (-)
G135048 NA non-coding downstream 149506 20798175 ~ 20798592 (-)
G135047 NA non-coding downstream 160664 20782919 ~ 20787434 (-)
G135037 NA non-coding downstream 209994 20721970 ~ 20738104 (-)
G135035 NA non-coding downstream 226462 20721345 ~ 20721636 (-)
G135128 NA non-coding upstream 47312 21000418 ~ 21004258 (-)
G135134 NA non-coding upstream 69807 21022913 ~ 21023885 (-)
G135141 NA non-coding upstream 88563 21041669 ~ 21042315 (-)
G135176 NA non-coding upstream 127635 21080741 ~ 21081662 (-)
G135180 hdgf,LOC102779439 non-coding upstream 138161 21091267 ~ 21093247 (-)
G134942 NA other downstream 708838 20238384 ~ 20239260 (-)
csmd3b LOC102796854,LOC102292540,LOC101468178 other downstream 871558 19693055 ~ 20076540 (-)
tshz1 LOC103358534 other downstream 1258092 19524178 ~ 19690006 (-)
G134893 LOC104963956 other downstream 1474987 19464345 ~ 19473111 (-)
rbm24a rbm24 other downstream 2931070 18006128 ~ 18017028 (-)
G135403 NA other upstream 744314 21697420 ~ 21752377 (-)
dpm3 dpm3 other upstream 807562 21760668 ~ 21762194 (-)
trim46b LOC100708191,LOC102303754,LOC104953682,LOC101470499 other upstream 820905 21774011 ~ 21788648 (-)
G135409 LOC104953684,LOC101065219,LOC103356278,LOC104927535 other upstream 843455 21796561 ~ 21798555 (-)
rps27.1 LOC106605923,LOC107582081,LOC107589412,LOC107699547,LOC108429942,LOC100696027,LOC104929087,LOC107084035,LOC106588181,LOC106917908 other upstream 905698 21858804 ~ 21862624 (-)

Expression


Co-expression Network