mindy1 (fam63a)


Basic Information

Item Value
gene id mindy1
gene name fam63a
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35378839 ~ 35444328 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186837
GGTGGCGCTGTAGCTGTGGCTGTCGGGGGTGCGGCAGCGGCAGTGGGGGGTGCGGCAGCAGCGGAGGCGGGGCCAACCATGCCGGCCTATTACCTGGTGAAGTGGATCACCTGGAAGGAGAAGAAGACGCCCATCATCACGCAGAGTGAGAACGGGCCCTGCCCCCTGCTGGCCATCATGAACACACTGTTCCTCCGCTGGAAGgctaAACTTCCTGCTCAGACTGAAGTCGTCACAACTGAGGACCTGATGGCTCACCTGggtgagtgtgtgttgtctgttacACCCAGAGAGAAGGCCAACGGGATGGAGCTCAACTTccaacagaacATGAGTGATGCCATGGCCGTGCTCCCTAAGCTGTCCACAGGTCTGGACGTCAACGTTCGTTTCACCGGAGTGACCGACTTCGAGTACACGCCGGAGTGCATCGCGTTCGACCTGCTGGACATCCCGCTGTACCACGGCTGGCTGGTCGAcccacagAGTCCAGAGGTGGTGGCTTCTGTGGGGAAACTGAGCTACAACCAGCTGGTGGAGAAAATCATCGACTACAAACACTCAGCAGACAGCAGCCGAGTCAgtgaaggtctGGTAGCAGAGCAGTTCCTAGAGTCCACAGCGACCCAGCTCTCCTATCACGGTCTGTGTGAACTCAACACGACGGCCAAGGAGGGAGAGATCTCTGTGTTCTTCAGAAACAACCACTTCAGTACCATGATCAAACACAagGGCCACCTGTACCTGCTGGTGACCGACCAGGGCTTCCTGCAGGAGGACAGTCTGGTCTGGGAGTCTCTTCACAACGTCGAGGGAGACGGGAACTTCTGCGACTCCGACTTCAGGCTGT
>XM_039820347.1
GTGGCGCTGTAGCTGTGGCTGTCGGGGGTGCGGCAGCGGCAGTGGGGGGTGCGGCAGCAGCGGAGGCGGGGCCAACCATGCCGGCCTATTACCTGGTGAAGTGGATCACCTGGAAGGAGAAGAAGACGCCCATCATCACGCAGAGTGAGAACGGGCCCTGCCCCCTGCTGGCCATCATGAACACACTGTTCCTCCGCTGGAAGgctaAACTTCCTGCTCAGACTGAAGTCGTCACAACTGAGGACCTGATGGCTCACCTGggtgagtgtgtgttgtctgttacACCCAGAGAGAAGGCCAACGGGATGGAGCTCAACTTccaacagaacATGAGTGATGCCATGGCCGTGCTCCCTAAGCTGTCCACAGGTCTGGACGTCAACGTTCGTTTCACCGGAGTGACCGACTTCGAGTACACGCCGGAGTGCATCGCGTTCGACCTGCTGGACATCCCGCTGTACCACGGCTGGCTGGTCGAcccacagAGTCCAGAGGTGGTGGCTTCTGTGGGGAAACTGAGCTACAACCAGCTGGTGGAGAAAATCATCGACTACAAACACTCAGCAGACAGCAGCCGAGTCAgtgaaggtctGGTAGCAGAGCAGTTCCTAGAGTCCACAGCGACCCAGCTCTCCTATCACGGTCTGTGTGAACTCAACACGACGGCCAAGGAGGGAGAGATCTCTGTGTTCTTCAGAAACAACCACTTCAGTACCATGATCAAACACAagGGCCACCTGTACCTGCTGGTGACCGACCAGGGCTTCCTGCAGGAGGACAGTCTGGTCTGGGAGTCTCTTCACAACGTCGAGGGAGACGGGAACTTCTGCGACTCCGACTTCAGGCTGTGTCACCTCCAAGAGAGCGCCGCCCGCGCATGGCATGGCCAGCGCCAGGACCAGCAGAGACAGATCGACCAGGACTACCTGGTGGCGGTgtccctgcagcagcagcagggcggGGCCCCGGGGCCCCTCAGTGACCTGGAGTTGGCCCGACAGCTCCAACAGGAAGAAtaccagcaacagcagcagcaactacagcagcaacagcaacagcaaccaCAGCAACAACAAGGATCGCCTGCTGCAGCAACGCAGgtcagaggtcaggggtCACAGCAGGGCGGAGCGCGGAGAAGAGAGAAGGACTCGGACTGTGTCGTCCTATAGACTCCTTTTATTATCATTGTAATCTATtgagacgcacagacacacacacacacacacacacacacacacaga

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase MINDY-1

GO: NA

KEGG:

id description
K01309 MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
TU186837 False 850 TUCP 0.58 7 35378839 35385463
XM_039820347.1 True 1244 mRNA 0.58 10 35378840 35444328

Neighbor

gene id symbol gene type direction distance location
LOC120570960 LOC106675582 coding upstream 37072 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 42418 35332912 ~ 35336421 (+)
LOC120571418 NA coding upstream 51824 35317578 ~ 35327015 (+)
LOC120571393 NA coding upstream 164527 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 201480 35161800 ~ 35177359 (+)
LOC120571395 NA coding downstream 3446 35447774 ~ 35467170 (+)
LOC120571399 NA coding downstream 13219 35457547 ~ 35459609 (+)
LOC120571424 LOC106633724 coding downstream 70793 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 509527 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 512089 35956417 ~ 35958468 (+)
G138721 NA non-coding upstream 5267 35337133 ~ 35373572 (+)
G138772 NA non-coding upstream 22361 35347032 ~ 35356478 (+)
G138770 NA non-coding upstream 29267 35339432 ~ 35349572 (+)
G138769 NA non-coding upstream 56585 35321925 ~ 35322254 (+)
G138764 NA non-coding upstream 93256 35284677 ~ 35285583 (+)
G138728 NA non-coding downstream 16096 35460424 ~ 35467841 (+)
G138715 NA non-coding downstream 39082 35483410 ~ 35527783 (+)
G138781 NA non-coding downstream 44279 35488607 ~ 35490914 (+)
G138748 LOC106676976 non-coding downstream 106441 35550769 ~ 36011779 (+)
G138719 NA non-coding downstream 114385 35558713 ~ 35566787 (+)
LOC120570961 NA other upstream 1633 35371967 ~ 35377206 (+)
mllt11 NA other upstream 61975 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 88584 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 805462 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1200293 34163590 ~ 34178546 (+)
LOC120570962 LOC106676000,LOC106675582 other downstream 52549 35496877 ~ 35551155 (+)
LOC120570963 fam63a,LOC107589430 other downstream 74588 35518916 ~ 35614565 (+)
G138806 NA other downstream 262572 35706900 ~ 35724402 (+)
LOC120571439 LOC106675582 other downstream 358976 35803304 ~ 35818966 (+)
LOC120571445 LOC106675582,LOC106676976 other downstream 565659 36009987 ~ 36104537 (+)

Expression


Co-expression Network