LOC120570961


Basic Information

Item Value
gene id LOC120570961
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35371967 ~ 35377206 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186852
AGGGATGTAAACAGCTAACAGCTTAGCAGCTATCATGCCCGTTCACCAGTCAGCGTCGGCTCAGACCACACACCTACACCCGGTGCCGGTCTGACAGGAAGTGTGACGCTCTGCTTCCTGTCCgcaggagagaagaagaaaacagaagaagaagagtttcTGCCTCTTTAGCTTCATCagtaatcattcattcagccttAACCTCTGCCATAAAGAAGCTGTGTGTCACGGTCACATAGAAAGGCGCCTTTTCGGTATTTTGGCACTCTGTTTTCTACTTAAACCctgccccctcctccctctccccgcGGCGGCCATGTTGGGGCCTCAGTTGCTTCCCGCCATCGCCATAGCTGCGCCTTTGTCTTAAAATCTAaccctttttttaaaagtttgggACCAAAGCGAAAGCTCCTTAAACTGCTGCTGAGattctcattcattcattctgtaaaatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacagagagacacagacacagagacacacacacacacacacacacacagagacacacacacttattccaCATTATTTCGTTGCTTTTTTTATCGCTGCTTTTGATTCGTCGGTGTCTAGCCGGTCGGCCAATCAATGGCGCAGTCGGGCTCGGTGGCGTCTGCCGACCTGCCGATCGAAGACGACAACGAGGACGCGTCTCTCGCCGCCAAGAGCGCCGCTAAACAGCTGATCGTAACCACGGCGACGAAGACGGAGGGCTCGGACGCCGGAGCCGAGatgaagagcagcagcagcagcagcgacgGCGCCGACGATGGTCCTCGTCCCTCCAAAGTCCCGAAAGATGGCGAGGAAAAGGACGACcgggaggtggaggagggaggaagaggaggaagaggccaCGCCCACGCCGCCGGATTCGTCTTCACTGTCGTCCGAGAACGGGACGATGACCGGCGCCGTCACGGAGGAGGAATCTCTCTCGGCTCGACTCAGACACAACAAGGagccagGTCTGGACCTGGAGGAGAGTCTCGTCTCCGTGGCAACGACGACGACGGGCAGGCC
>TU186853
AGGGATGTAAACAGCTAACAGCTTAGCAGCTATCATGCCCGTTCACCAGTCAGCGTCGGCTCAGACCACACACCTACACCCGGTGCCGGTCTGACAGGAAGTGTGACGCTCTGCTTCCTGTCCgcaggagagaagaagaaaacagaagaagaagagtttcTGCCTCTTTAGCTTCATCagtaatcattcattcagccttAACCTCTGCCATAAAGAAGCTGTGTGTCACGGTCACATAGAAAGGCGCCTTTTCGGTATTTTGGCACTCTGTTTTCTACTTAAACCctgccccctcctccctctccccgcGGCGGCCATGTTGGGGCCTCAGTTGCTTCCCGCCATCGCCATAGCTGCGCCTTTGTCTTAAAATCTAaccctttttttaaaagtttgggACCAAAGCGAAAGCTCCTTAAACTGCTGCTGAGattctcattcattcattctgtaaaatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacagagacacacacagacagagatacacacacacacacacaca
>XM_039819647.1
TGTTTGTTCCTCGGTGGGCGTGGCTTCTTACGTTCCTGGCAGAGAGGGATGTAAACAGCTAACAGCTTAGCAGCTATCATGCCCGTTCACCAGTCAGCGTCGGCTCAGACCACACACCTACACCCGGTGCCGGTCTGACAGGAAGTGTGACGCTCTGCTTCCTGTCCgcaggagagaagaagaaaacagaagaagaagagtttcTGCCTCTTTAGCTTCATCagtaatcattcattcagccttAACCTCTGCCATAAAGAAGCTGTGTGTCACGGTCACATAGAAAGGCGCCTTTTCGGTATTTTGGCACTCTGTTTTCTACTTAAACCctgccccctcctccctctccccgcGGCGGCCATGTTGGGGCCTCAGTTGCTTCCCGCCATCGCCATAGCTGCGCCTTTGTCTTAAAATCTAaccctttttttaaaagtttgggACCAAAGCGAAAGCTCCTTAAACTGCTGCTGAGattctcattcattcattctgtaaaatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagacagagagacacagacacagagacacacacacacacacacacacacagagacacacacacttattccaCATTATTTCGTTGCTTTTTTTATCGCTGCTTTTGATTCGTCGGTGTCTAGCCGGTCGGCCAATCAATGGCGCAGTCGGGCTCGGTGGCGTCTGCCGACCTGCCGATCGAAGACGACAACGAGGACGCGTCTCTCGCCGCCAAGAGCGCCGCTAAACAGCTGATCGTAACCACGGCGACGAAGACGGAGGGCTCGGACGCCGGAGCCGAGatgaagagcagcagcagcagcagcgacgGCGCCGACGATGGTCCTCGTCCCTCCAAAGTCCCGAAAGATGGCGAGGAAAAGGACGACcgggaggtggaggagggaggaagaggaggaagaggccaCGCCCACGCCGCCGGATTCGTCTTCACTGTCGTCCGAGAACGGGACGATGACCGGCGCCGTCACGGAGGAGGAATCTCTCTCGGCTCGACTCAGACACAACAAGGagccagGTCTGGACCTGGAGGAGAGTCTCGTCTCCGTGGCAACGACGACGACGGGCAGGCCACTGACTTCAGCAGCGGGTTCACAGACCGGGCGCCCCTCCCCTGCCGAAAGCCCGAGCTGTCGGACGCCATCGGCTCACCGCTGCACCCCTGGACGCCGGACGCCCTCTCAACCAACGAGGTTTCCAGTTTGGAAGGAGGATCGACGCTGGCAGCTGGAGGCCGGTGA

Function

GO: NA

KEGG:

id description
ko04140 Autophagy - animal
ko04138 Autophagy - yeast
ko04136 Autophagy - other

RNA

RNA id representative length rna type GC content exon number start site end site
TU186852 False 1107 TUCP 0.55 3 35372011 35377038
TU186853 False 582 lncRNA 0.49 3 35372011 35375522
XM_039819647.1 True 1319 mRNA 0.57 3 35371967 35377206

Neighbor

gene id symbol gene type direction distance location
LOC120570960 LOC106675582 coding upstream 30200 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 35546 35332912 ~ 35336421 (+)
LOC120571418 NA coding upstream 44952 35317578 ~ 35327015 (+)
LOC120571393 NA coding upstream 157655 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 194608 35161800 ~ 35177359 (+)
LOC120571395 NA coding downstream 70568 35447774 ~ 35467170 (+)
LOC120571399 NA coding downstream 80341 35457547 ~ 35459609 (+)
LOC120571424 LOC106633724 coding downstream 137915 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 576649 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 579211 35956417 ~ 35958468 (+)
G138772 NA non-coding upstream 15489 35347032 ~ 35356478 (+)
G138770 NA non-coding upstream 22395 35339432 ~ 35349572 (+)
G138769 NA non-coding upstream 49713 35321925 ~ 35322254 (+)
G138764 NA non-coding upstream 86384 35284677 ~ 35285583 (+)
G138652 NA non-coding upstream 223426 35147627 ~ 35148541 (+)
G138776 NA non-coding downstream 14234 35391440 ~ 35816515 (+)
G138666 NA non-coding downstream 14880 35392086 ~ 35541529 (+)
G138728 NA non-coding downstream 83218 35460424 ~ 35467841 (+)
G138715 NA non-coding downstream 106204 35483410 ~ 35527783 (+)
G138781 NA non-coding downstream 111401 35488607 ~ 35490914 (+)
mllt11 NA other upstream 55103 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 81712 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 798590 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1193421 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 1425004 33890732 ~ 33946963 (+)
mindy1 fam63a other downstream 1633 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 26230 35403436 ~ 35517319 (+)
G138692 LOC106676976,LOC106675582 other downstream 62085 35439291 ~ 35497618 (+)
LOC120571400 LOC106675582,LOC106676976,LOC106675585,LOC101480093 other downstream 62141 35439347 ~ 35516617 (+)
LOC120570962 LOC106676000,LOC106675582 other downstream 119671 35496877 ~ 35551155 (+)

Expression


Co-expression Network