G138670



Basic Information


Item Value
gene id G138670
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35326329 ~ 35389253 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU186864
acacacacacacacagacacacacacagacacacacacacacacacagacagacacacacacatacacacacacacacacacacagacagacagacagacagacagacagacagacagacagagacacacacacatagaaacacacagactcacacacacactcacacagacagacacagacttacacacacagacaaacagagacagacacacacacacacacacacagctcgaTGCCAAACCCCAGTGCTTTCTTTGATAAACAGTTTGTCTCAGACGTGATTCCGAGTTTTTGGAAAGTTTATAAGAAATGTGAGAAGGTCCCACAGAGTCTGGtggagcgcacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggtaccgCTGTCTGATAGAAAGGTCTACGAGTCGCAACAAACAGCTTTATTAACGGCCAATAATTAATAATTCTCTAAAGCTTAACTGGTCCCAAATCATCCTTTTTAAGAAGAATAACTTCTGGGTGGACAGGCTGTGAGAAACTGACGAGTTAAGAGCTGAGAAATAATCCCAAATGATGCAGAATTAAGCAGAATTATCCacaaaagtttgtctgtatttgtgaCTGACCTATAAAGCATTAGGGGATATTTACTGGCTGTTAATATAGAGCTGATGGCGATGGTATCTCATATATCTATGAAGGGAAACTGTTGGAAAATCCGTTAACTTAAATCTGTATTTTATGTAAAATCTCTCTTTTCTGATTGGACCAGTTTCTCCAGTAAAGGTCCGACcggttctcactccgaactcgtcaAGATACGGACGCCAGTGTCTCTCGGCGTCGGATAGGACGCCAAAAATccactttttttaaaggtgttatatactatatatataataatccgatgaagtagctcatccaatcacatcgaagcattgacgtcaatgctgctgctgccagttctgccgttgtttacctttttcttcttcttcttctagtccgtagaaagatcagcgtcggtagcctttgctcgTTAGCGCCcccgctgttcaggagaagaccgCAACTTCATAAAAGCGATTtcaggaacacaccgacttattgggactttgtct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU186864 True 1182 lncRNA 0.44 3 35326329 35389253

Neighbor


gene id symbol gene type direction distance location
LOC120571393 NA coding upstream 112017 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 148970 35161800 ~ 35177359 (+)
rfx5 rfx5 coding upstream 295792 35020790 ~ 35030537 (+)
psmb4 psmb4 coding upstream 306147 35013313 ~ 35020182 (+)
LOC120571430 NA coding upstream 361049 34964583 ~ 34965280 (+)
LOC120571395 NA coding downstream 58521 35447774 ~ 35467170 (+)
LOC120571399 NA coding downstream 68294 35457547 ~ 35459609 (+)
LOC120571424 LOC106633724 coding downstream 125868 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 564602 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 567164 35956417 ~ 35958468 (+)
G138769 NA non-coding upstream 4075 35321925 ~ 35322254 (+)
G138764 NA non-coding upstream 40746 35284677 ~ 35285583 (+)
G138652 NA non-coding upstream 177788 35147627 ~ 35148541 (+)
G138646 NA non-coding upstream 197176 35128905 ~ 35129153 (+)
G138599 NA non-coding upstream 294540 35031014 ~ 35031789 (+)
G138776 NA non-coding downstream 2187 35391440 ~ 35816515 (+)
G138666 NA non-coding downstream 2833 35392086 ~ 35541529 (+)
G138728 NA non-coding downstream 71171 35460424 ~ 35467841 (+)
G138715 NA non-coding downstream 94157 35483410 ~ 35527783 (+)
G138781 NA non-coding downstream 99354 35488607 ~ 35490914 (+)
mllt11 NA other upstream 9465 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 36074 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 752952 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1147783 34163590 ~ 34178546 (+)
LOC120572044 NA other upstream 1379366 33890732 ~ 33946963 (+)
LOC120571398 NA other downstream 14183 35403436 ~ 35517319 (+)
G138692 LOC106676976,LOC106675582 other downstream 50038 35439291 ~ 35497618 (+)
LOC120571400 LOC106675582,LOC106676976,LOC106675585,LOC101480093 other downstream 50094 35439347 ~ 35516617 (+)
LOC120570962 LOC106676000,LOC106675582 other downstream 107624 35496877 ~ 35551155 (+)
LOC120570963 fam63a,LOC107589430 other downstream 129663 35518916 ~ 35614565 (+)

Expression



Co-expression Network