G138684


Basic Information

Item Value
gene id G138684
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36184037 ~ 36193304 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186879
ctggactctgtggaggagagtcatggtttcagagacgctgtagaaggacagaatacctgcactgtgatccaggtacactcctactctggaggactctggacctgagacgggagtttggactttgttggaccaaaatgtatatttgttgttgtaacAATCTAACgcccaagatttgtcatttCGTCCAAATAAACATTCCTCCGACCtccctgctctgctgatattcttgtatgcgactgctacataaactcctcctctcctctccacctcccagtaacaacgtccagtcagactctctctactcaggacctgatACCTGTtagtgaatctgtctgggtgactagaataagactgttgttgtttcatgtatgttgctttcctgttcccctcagataataacagccgtgtgtttgctgtgtttggatccagtgtgatgtcaggtgaatattttaagaatccagctctggtcttgCGCTCTGGTTGTGACAGTAAAACGTTCCTTCACTCCTCGAggcttttttctgcattttgatgcttttttaattttttgactCATTCAAGACTTTTGTTGAtgctttttgatacattttcaatgtttttttacgGTGGTTTTTATTGAAAGCTTTTTTGACGctcgctacaacacacacacacacatggacacacacacactctctcacacacacacacacacacgtgaacacacaatgacacacacacacacacacacacaaacacacacacacacatggacacacacacatacacacacaatgacacacacacacacacaaacacactctcacacacacacacacacatggacacacacagacacacacatggacacacacacacacacacacatgcacatacacacacatggacacaccacacacacacacacacaatgacacacacacacaaacacacacacacacatggacacacacacatacacacacaatgacatacacacacacacaaacacactgtcacacacacacacacacacacgtggacacacacagacacacacacgtggacacacacacacatgcacacacacaggtggacacacatgtacacacacacacggacacacactgtcacacacatacaaactcacacacacaaacacacacacaatgacacacacacacaaacacactctctctcacacacacacacactctctgctgagttgtgtaaactgaaatagtcaGAAGTCATTTCaggttaaattctgtgttttaactcttaaataatataataattatttagtCTCCATGTTTGTAGCTGAGAGatgattgttgtcttttttcatttgtttacacgtttttgttgctttttcttactttttttgcttttataaaaacatgtcaCTTTCTTCGATATCTATCTGCTTTTCTAAAcgtttttgtacatttctttgaCGTCTTTGTTTGCATGTATTGACGTTTTAGAAGTGATGAGATGATTTCTgtgtgttgatgaaaaccattcgGGGAGCCCCAGAAGCTCTCAATGTGCTCAGTTGAGATCTGTTATTTTACCTTTGATTGTTGAAACAAGGACGATATGTTAAAAAAGATCTTTACCGAGATgatctggagatattagctgtttgttattcatgtatttctccacgTTATGTATCTGCGGGACAGGAAGATGTCTGTTAAATAGCGGTGTCTTAATAGTGTATATAAGGGTGTTTAAGTTGTATGTTAATATAGACAAGTCGAAGAAAATCTTTCAAGGTGGCAGAAATGCTTCAGGACATTGTATTTCTGaatatatctgatatgtttggcattttatctcata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186879 True 1830 lncRNA 0.41 2 36184037 36193304

Neighbor

gene id symbol gene type direction distance location
LOC120570972 NA coding upstream 30811 36148521 ~ 36153226 (+)
riok1 riok1 coding upstream 179803 35979893 ~ 36004234 (+)
LOC120571435 NA coding upstream 225569 35956417 ~ 35958468 (+)
LOC120570967 LOC106675582 coding upstream 228878 35953855 ~ 35955159 (+)
LOC120571424 LOC106633724 coding upstream 668255 35515121 ~ 35515782 (+)
LOC120571441 NA coding downstream 2046 36195350 ~ 36256121 (+)
LOC120570973 NA coding downstream 81609 36274913 ~ 36277816 (+)
LOC120571542 NA coding downstream 88979 36282283 ~ 36292736 (+)
LOC120571543 NA coding downstream 113346 36306650 ~ 36317353 (+)
LOC120570974 NA coding downstream 134382 36327686 ~ 36335190 (+)
G138717 NA non-coding upstream 28800 36105348 ~ 36155237 (+)
G138829 LOC101480093,LOC101481809 non-coding upstream 30623 36105065 ~ 36153414 (+)
G138746 NA non-coding upstream 53453 36095674 ~ 36130584 (+)
G138830 NA non-coding upstream 71869 36111847 ~ 36112168 (+)
G138754 NA non-coding upstream 77802 36105817 ~ 36106235 (+)
G138731 LOC106675582 non-coding downstream 35814 36229118 ~ 36246720 (+)
G138755 NA non-coding downstream 42366 36235670 ~ 36249048 (+)
G138837 NA non-coding downstream 64233 36257537 ~ 36257811 (+)
G138838 NA non-coding downstream 64728 36258032 ~ 36258966 (+)
G138842 NA non-coding downstream 81128 36274432 ~ 36290718 (+)
LOC120571445 LOC106675582,LOC106676976 other upstream 79500 36009987 ~ 36104537 (+)
LOC120571439 LOC106675582 other upstream 365071 35803304 ~ 35818966 (+)
G138806 NA other upstream 459635 35706900 ~ 35724402 (+)
LOC120570963 fam63a,LOC107589430 other upstream 569472 35518916 ~ 35614565 (+)
LOC120570962 LOC106676000,LOC106675582 other upstream 632882 35496877 ~ 35551155 (+)
G138693 NA other downstream 36026 36229330 ~ 36247084 (+)
gabpb2a gabpb2,LOC102789669 other downstream 145092 36338396 ~ 36354102 (+)
G138883 NA other downstream 299799 36493103 ~ 36505934 (+)
G138668 NA other downstream 319302 36512606 ~ 36516582 (+)
LOC120571613 NA other downstream 333225 36526529 ~ 36532535 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G39704 NA non-coding CI01000005 null 6447175 ~ 6449839 (+)