G138692 (LOC106676976,LOC106675582)


Basic Information

Item Value
gene id G138692
gene name LOC106676976,LOC106675582
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35439291 ~ 35497618 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186887
TCAGGAAGTGAGACAcaagacagtcagacagtcgtagtcactgagcgagaggtgaaatggcgaagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtggctattccctgtggacacagctactgcatgaactgtattaaaggCTTCTGGGATGAAAGGGATGAGAAGGAAATGTACAGCTGCCCTCAGTGCAGGCAGAGcttcacaccgaggcctgtactggtgaaaaacaccatgttagcagctttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatttCTGTACCGGGAGAAAACTCAAAGCCATCAAATCCTGCCTGTTGTGTCTGATCTCTTATTGTGAGAAACACCTTCAGCCTCATTACGATGTAGCTCAgttaaagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctCGTCACGATGAGGTAATGAAGATTTTCTGCcgtactgatcagcagcttatctgttctctctgctctgtggaCGAACATAAAGGCCACGATACAATCTCAGCTGCAGAAGAAAGGATTGAGAGGCAGAAAAAGCTCGGGGGGAGGCGACAgaccatccagcagagaatcc

Function

NR:

description
tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186887 True 690 TUCP 0.50 3 35439291 35497618

Neighbor

gene id symbol gene type direction distance location
LOC120570960 LOC106675582 coding upstream 97524 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 102870 35332912 ~ 35336421 (+)
LOC120571418 NA coding upstream 112276 35317578 ~ 35327015 (+)
LOC120571393 NA coding upstream 224979 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 261932 35161800 ~ 35177359 (+)
LOC120571424 LOC106633724 coding downstream 17503 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 456237 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 458799 35956417 ~ 35958468 (+)
riok1 riok1 coding downstream 482275 35979893 ~ 36004234 (+)
LOC120570972 NA coding downstream 650903 36148521 ~ 36153226 (+)
G138670 NA non-coding upstream 50038 35326329 ~ 35389253 (+)
G138721 NA non-coding upstream 65719 35337133 ~ 35373572 (+)
G138772 NA non-coding upstream 82813 35347032 ~ 35356478 (+)
G138770 NA non-coding upstream 89719 35339432 ~ 35349572 (+)
G138769 NA non-coding upstream 117037 35321925 ~ 35322254 (+)
G138748 LOC106676976 non-coding downstream 53151 35550769 ~ 36011779 (+)
G138719 NA non-coding downstream 61095 35558713 ~ 35566787 (+)
G138725 NA non-coding downstream 119042 35616660 ~ 35704687 (+)
G138795 NA non-coding downstream 136819 35634437 ~ 35635272 (+)
G138799 NA non-coding downstream 167477 35665095 ~ 35665716 (+)
LOC120570961 NA other upstream 62085 35371967 ~ 35377206 (+)
mllt11 NA other upstream 122427 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 149036 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 865914 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1260745 34163590 ~ 34178546 (+)
LOC120570963 fam63a,LOC107589430 other downstream 21298 35518916 ~ 35614565 (+)
G138806 NA other downstream 209282 35706900 ~ 35724402 (+)
LOC120571439 LOC106675582 other downstream 305686 35803304 ~ 35818966 (+)
LOC120571445 LOC106675582,LOC106676976 other downstream 512369 36009987 ~ 36104537 (+)
G138676 NA other downstream 567753 36065371 ~ 36257319 (+)

Expression


Co-expression Network