G138711 (LOC106675582,LOC106676000)


Basic Information

Item Value
gene id G138711
gene name LOC106675582,LOC106676000
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36138147 ~ 36215671 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186906
CAACAGCGTATCACTGCTGTTATTACATCAGAGCTCAGACTAGTTTCATTTCTCAGGAAGTGAGACACAAGACAGTCAGACATTCGTTGTCACTGagcgagaggtgaaatggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaaggCTTCTGGGATGAAGAGGATGAGAAGGAAATGTACAGCTGCCCTCAGTGCAGGCAGAGcttcacaccgaggcctgtACTGCTGAAAAGCACCATGTTGGCAGctttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcaccgGGAGAAAGCTCAAAGCCATCAAATCCTGCCTGGTTTGTCTGATCTCTTATTGTGAGAAACACCTTCAGCCTCATTTTG

Function

NR:

description
tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186906 True 505 TUCP 0.49 2 36138147 36215671

Neighbor

gene id symbol gene type direction distance location
riok1 riok1 coding upstream 133913 35979893 ~ 36004234 (+)
LOC120571435 NA coding upstream 179679 35956417 ~ 35958468 (+)
LOC120570967 LOC106675582 coding upstream 182988 35953855 ~ 35955159 (+)
LOC120571424 LOC106633724 coding upstream 622365 35515121 ~ 35515782 (+)
LOC120571399 NA coding upstream 678538 35457547 ~ 35459609 (+)
LOC120570973 NA coding downstream 59242 36274913 ~ 36277816 (+)
LOC120571542 NA coding downstream 66612 36282283 ~ 36292736 (+)
LOC120571543 NA coding downstream 90979 36306650 ~ 36317353 (+)
LOC120570974 NA coding downstream 112015 36327686 ~ 36335190 (+)
anp32e anp32e,LOC103368512 coding downstream 146654 36362325 ~ 36372221 (+)
G138746 NA non-coding upstream 7563 36095674 ~ 36130584 (+)
G138830 NA non-coding upstream 25979 36111847 ~ 36112168 (+)
G138754 NA non-coding upstream 31912 36105817 ~ 36106235 (+)
G138702 NA non-coding upstream 86993 36039527 ~ 36051154 (+)
G138825 NA non-coding upstream 101328 36036407 ~ 36036819 (+)
G138731 LOC106675582 non-coding downstream 13447 36229118 ~ 36246720 (+)
G138755 NA non-coding downstream 19999 36235670 ~ 36249048 (+)
G138837 NA non-coding downstream 41866 36257537 ~ 36257811 (+)
G138838 NA non-coding downstream 42361 36258032 ~ 36258966 (+)
G138842 NA non-coding downstream 58761 36274432 ~ 36290718 (+)
LOC120571445 LOC106675582,LOC106676976 other upstream 33610 36009987 ~ 36104537 (+)
LOC120571439 LOC106675582 other upstream 319181 35803304 ~ 35818966 (+)
G138806 NA other upstream 413745 35706900 ~ 35724402 (+)
LOC120570963 fam63a,LOC107589430 other upstream 523582 35518916 ~ 35614565 (+)
LOC120570962 LOC106676000,LOC106675582 other upstream 586992 35496877 ~ 35551155 (+)
G138693 NA other downstream 13659 36229330 ~ 36247084 (+)
gabpb2a gabpb2,LOC102789669 other downstream 122725 36338396 ~ 36354102 (+)
G138883 NA other downstream 277432 36493103 ~ 36505934 (+)
G138668 NA other downstream 296935 36512606 ~ 36516582 (+)
LOC120571613 NA other downstream 310858 36526529 ~ 36532535 (+)

Expression


Co-expression Network