G138748 (LOC106676976)


Basic Information

Item Value
gene id G138748
gene name LOC106676976
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35550769 ~ 36011779 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186943
AATGACAAATCTTGGGCGTTATAttgtaacaacaacaaatatatattttggtcCAACAAAGTCCAAACTCCCGTCTCAGgtcctcggtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGAC

Function

NR:

description
tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186943 True 211 lncRNA 0.47 2 35550769 36011779

Neighbor

gene id symbol gene type direction distance location
LOC120571424 LOC106633724 coding upstream 34987 35515121 ~ 35515782 (+)
LOC120571395 NA coding upstream 83599 35447774 ~ 35467170 (+)
LOC120571399 NA coding upstream 91160 35457547 ~ 35459609 (+)
LOC120570960 LOC106675582 coding upstream 209002 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 214348 35332912 ~ 35336421 (+)
LOC120570972 NA coding downstream 136742 36148521 ~ 36153226 (+)
LOC120571441 NA coding downstream 183571 36195350 ~ 36256121 (+)
LOC120570973 NA coding downstream 263134 36274913 ~ 36277816 (+)
LOC120571542 NA coding downstream 270504 36282283 ~ 36292736 (+)
LOC120571543 NA coding downstream 294871 36306650 ~ 36317353 (+)
G138666 NA non-coding upstream 9240 35392086 ~ 35541529 (+)
G138715 NA non-coding upstream 22986 35483410 ~ 35527783 (+)
G138781 NA non-coding upstream 59855 35488607 ~ 35490914 (+)
G138728 NA non-coding upstream 82928 35460424 ~ 35467841 (+)
G138670 NA non-coding upstream 161516 35326329 ~ 35389253 (+)
G138825 NA non-coding downstream 24628 36036407 ~ 36036819 (+)
G138702 NA non-coding downstream 27748 36039527 ~ 36051154 (+)
G138746 NA non-coding downstream 83895 36095674 ~ 36130584 (+)
G138829 LOC101480093,LOC101481809 non-coding downstream 93286 36105065 ~ 36153414 (+)
G138717 NA non-coding downstream 93569 36105348 ~ 36155237 (+)
LOC120571398 NA other upstream 33450 35403436 ~ 35517319 (+)
LOC120571400 LOC106675582,LOC106676976,LOC106675585,LOC101480093 other upstream 34152 35439347 ~ 35516617 (+)
G138692 LOC106676976,LOC106675582 other upstream 53151 35439291 ~ 35497618 (+)
mindy1 fam63a other upstream 106441 35378839 ~ 35444328 (+)
LOC120570961 NA other upstream 173563 35371967 ~ 35377206 (+)
G138676 NA other downstream 53592 36065371 ~ 36257319 (+)
LOC120571442 LOC106675582,LOC106676446 other downstream 94938 36106717 ~ 36215827 (+)
G138711 LOC106675582,LOC106676000 other downstream 126368 36138147 ~ 36215671 (+)
G138693 NA other downstream 217551 36229330 ~ 36247084 (+)
gabpb2a gabpb2,LOC102789669 other downstream 326617 36338396 ~ 36354102 (+)

Expression


Co-expression Network