LOC120570959


Basic Information

Item Value
gene id LOC120570959
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35240295 ~ 35290255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU186972
ttttaaatatacagaTATTTGTACAGAGTTTGGTTGGTGGCCTGGGTTCGGCTTGGACTCTCAAATCCAGATGTTACAGTTCTTATAAAGTGCTCAAATTAAAGTTTTTGGGGAATTtgaaccagttttttttttgccacaacTTCTCTAATACAAGAATCGTTCAACTCACATACCAAGAGACCCAAGTTAGCACCAAGCACACATCATCAGCGCGAAAGACAACAGGAAAAATCAAACAGTAAATTAACCAAAAACTGCAGAAAAGTCTGCGTAGAAAATGTTCAAATACTCAAAACAGAAAGCAGGTAAAACTTTATCTTCCCACCAGATGCATTATGAAATGTCTACGAGTTAAAAAGTTAACATTTTGGTCTTCCTGGGGGCCCAAAATATGTCAGATTAAAACCGTTTTGGGCCCCAACCCACAGTTTAAGTAGTAAAATGACCAAAAATCACAAAGACATATTGATATGAGTTCAAATAGagaatttttacaaaaacagctgattttctAATGGGAGTTTTGAACTGTGTGTCACCAGCCAACCTATGAGGGTTCCCACCGGATTGCAGGATGAAATATCTTAAACAGAAGTCCCGAAAATGTCTCAGCCTGGCACCTGAAGTTAAAACTGAAAAGGTCTGTCATCTTGGGACACAAAATATGTCAGATTAAGACCCGTTTTGTGCCCCAACCCACAGTTTAAGTAGTCAAATGACCAAAAATCACAAAGAAATATTGATATGAGTTGAAATAGagaatttttacaaaaatggctGATTTTCTAATGGGAGTTTTGAACTGTGTGTCCCAGCCAACCTCTGAGGGTTCCCACCAGAATGCAGCATGAAATCTTTCAAAGAAATGTCCTGAAAATGTCCCAACATGACACCTGAAGTTAAAAATTAACACTTCTGTCTTCTTGGGGTCCACAGTATGTGAGATTAAGACCTGTTTTGGGGCCCCCGACTCACAGTTCAAGTAGtcaaaaacagaaagagaaggaaaatcTTTTTAAGAGTTGAAATTAAAGAACTTTTAcaaaaacagctgattttctGATGGAAGTTTTGAACTGTGTGTCCCGAGTCCATCTCTGAGAGTTCAGTGAAGCCAAAAATAAAGGCGTAATAATCTTTTACAAGTAAATTCAGAGCACAGCTGAGCAGAGTGAAGCATCCTGGGAAATGTAGTCCACTGAGGGAAATGGAAAAGCTTTATTTTTGGAGGGCAGGGAGGGGGGGATTTCCACCAGCATGAGGGTTTAAAATGAAGGACTGATGGAGTTCTTCTCAACCCCTCAGAGCAGTGAAAAAAACTCTACCCTCCCTATGAATGCTGGGAAATGTAGTCCTTATCGTGACAATTTAAAAGCAACACTTTCGTAGccactttttcttcttcttattcttAAATACAGACATTCTCTCATTCTGCCGCACATCCTGAATTAGAAGGGGATTCTGGGAAATGGAGTCCAGTGATGTCATCGGTCGGGTTGATTTAATACTGAtgttgggtgggggggggttggggtagAAAACTCTGCCCGCTAGTTGAGAAAACATCTTCTGTTCTTAACTCCGATTCAAATGGTTtagattttaaattcaaaaaagtaaaaaaattaaaaataaaaataaaaaagtctccTTGATGTGCACTTTGAAAGGCAtgctgggagatgtagtccttGCCTTTTGTGCGGACAGATGCACAGCTGGTGGATGAATACTGGAACGACATAATACGAGCGACATTTTCACCCCTCTTTTAGAGAAGAGGTCTGTTTTTTAGGGTTCGGGATCGGGACAGCACTCCCTTGCGGGTGGCGTCGAAGCCTCTGGCTGGCAGTCGGATTTCGGAGATGAGGCTCGATCGGAAGAgagggaagggaaggagggaagggaaggagggaagggaaggagggaagggaaggaggagagagaaggagggaagagagaggttGGCCAGCAGGTCTACGTCAGATTAACACACTCCTGAAAAACAAGAGAAACAACAGACGGAGTCACTCGTTCCTCGGCTGCATTTAAGTGTGAAGAGCGCCAGAGAAGTTGGCGAGCCAGCCAGCAAGTAGAAATTACACAaagctgtgagtgtgtgtttctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtatatgtgtgtgtctgtgtgtatatgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtatatgtgtctgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtttgtgtgtttgtgtccgtgtgtatatgtgtctgtgtgtctgtgtgtgtgtatgtatgtatgtgtgtgtgtgtttctctgtgtgtgtgtgtgtttctctgtgtgtgtgtatgtgtgtatgtgtgtgtttctctgtgtgtgtgtatgtgtgtatgtgtgtgtttctctgtgtgtgtgt
>TU186974
ttttaaatatacagaTATTTGTACAGAGTTTGGTTGGTGGCCTGGGTTCGGCTTGGACTCTCAAATCCAGATGTTACAGTTCTTATAAAGTGCTCAAATTAAAGTTTTTGGGGAATTtgaaccagttttttttttgccacaacTTCTCTAATACAAGAATCGTTCAACTCACATACCAAGAGACCCAAGTTAGCACCAAGCACACATCATCAGCGCGAAAGACAACAGGAAAAATCAAACAGTAAATTAACCAAAAACTGCAGAAAAGTCTGCGTAGAAAATGTTCAAATACTCAAAACAGAAAGCAGGTAAAACTTTATCTTCCCACCAGATGCATTATGAAATGTCTACGAGTTAAAAAGTTAACATTTTGGTCTTCCTGGGGGCCCAAAATATGTCAGATTAAAACCGTTTTGGGCCCCAACCCACAGTTTAAGTAGTAAAATGACCAAAAATCACAAAGACATATTGATATGAGTTCAAATAGagaatttttacaaaaacagctgattttctAATGGGAGTTTTGAACTGTGTGTCACCAGCCAACCTATGAGGGTTCCCACCGGATTGCAGGATGAAATATCTTAAACAGAAGTCCCGAAAATGTCTCAGCCTGGCACCTGAAGTTAAAACTGAAAAGGTCTGTCATCTTGGGACACAAAATATGTCAGATTAAGACCCGTTTTGTGCCCCAACCCACAGTTTAAGTAGTCAAATGACCAAAAATCACAAAGAAATATTGATATGAGTTGAAATAGagaatttttacaaaaatggctGATTTTCTAATGGGAGTTTTGAACTGTGTGTCCCAGCCAACCTCTGAGGGTTCCCACCAGAATGCAGCATGAAATCTTTCAAAGAAATGTCCTGAAAATGTCCCAACATGACACCTGAAGTTAAAAATTAACACTTCTGTCTTCTTGGGGTCCACAGTATGTGAGATTAAGACCTGTTTTGGGGCCCCCGACTCACAGTTCAAGTAGtcaaaaacagaaagagaaggaaaatcTTTTTAAGAGTTGAAATTAAAGAACTTTTAcaaaaacagctgattttctGATGGAAGTTTTGAACTGTGTGTCCCGAGTCCATCTCTGAGAGTTCAGTGAAGCCAAAAATAAAGGCGTAATAATCTTTTACAAGTAAATTCAGAGCACAGCTGAGCAGAGTGAAGCATCCTGGGAAATGTAGTCCACTGAGGGAAATGGAAAAGCTTTATTTTTGGAGGGCAGGGAGGGGGGGATTTCCACCAGCATGAGGGTTTAAAATGAAGGACTGATGGAGTTCTTCTCAACCCCTCAGAGCAGTGAAAAAAACTCTACCCTCCCTATGAATGCTGGGAAATGTAGTCCTTATCGTGACAATTTAAAAGCAACACTTTCGTAGccactttttcttcttcttattcttAAATACAGACATTCTCTCATTCTGCCGCACATCCTGAATTAGAAGGGGATTCTGGGAAATGGAGTCCAGTGATGTCATCGGTCGGGTTGATTTAATACTGAtgttgggtgggggggggttggggtagAAAACTCTGCCCGCTAGTTGAGAAAACATCTTCTGTTCTTAACTCCGATTCAAATGGTTtagattttaaattcaaaaaagtaaaaaaattaaaaataaaaataaaaaagtctccTTGATGTGCACTTTGAAAGGCAtgctgggagatgtagtccttGCCTTTTGTGCGGACAGATGCACAGCTGGTGGATGAATACTGGAACGACATAATACGAGCGACATTTTCACCCCTCTTTTAGAGAAGAGGTCTGTTTTTTAGGGTTCGGGATCGGGACAGCACTCCCTTGCGGGTGGCGTCGAAGCCTCTGGCTGGCAGTCGGATTTCGGAGATGAGGCTCGATCGGAAGAgagggaagggaaggagggaagggaaggagggaagggaaggagggaagggaaggaggagagagaaggagggaagagagaggttGGCCAGCAGGTCTACGTCAGATTAACACACTCCTGAAAAACAAGAGAAACAACAGACGGAGTCACTCGTTCCTCGGCTGCATTTAAGTGTGAAGAGCGCCAGAGAAGTTGGCGAGCCAGCCAGCAAGTAGAAATTACACAaagctgtgagtgtgtgtttctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtttatgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtg
>XM_039819645.1
ggaggtggaggtggaggtgacGGAGGAGGGAGAGCTgtctgaggaggaagaggATGATGATGACTCCAAGAGTCAGGATAAGATTGAGGGAGTGGCTGGCGGCCATCAGACCACCGCGGCAGTGGCGGTCTTAGCGGCAGCAGCATCCGGAGGTTCAGATGTTGCAGCAGCAGGTGTTTCATACGAAAGTCAGGATCTGAGCGGTTCCCCAGGCTCTCCGGGTTCTCCAGGTCCTGCAGGCTCTCCAGGTTCTACAGGTTCTGCTGGTTCTGCTGGTTCTGCTGGTTCTGCTGGCTGCAGGTTCTGCAGGTCCAATAGCAGTAGAACTCTCTGGTGTCTCTGTTTCTCAGACTAAACCAGCAGGTTCTGACGGAGTCGACTCCGAGTCCAATGGTAACGGACAGAAGCTGCTGAATGGAGGAGGGGGCGTGGCTTACAGTCAGACAGgtGTTTTGGGTCCGTCTGGGGGCGGAGCTTCTTCCTTGGATTATACAGGAACCATCGACCCATCCAATCACGACTTCCTGCTCGGCCTGAtgggTGGAGGGGATCCGTTCAGTCCAGACGTTCACATCGACATCCCAGGTCACGTGACTCTGCCCACGCAGCTGGACTCTATAGGGATCAGTTCAGGTGTGACGGCGTCTGCAGAACAGAATGGTCTGGACTCACCAGCAGAATATCCCTCTGACGTCAGCATCGACCAATCAGGAGCAGCATCTCTGAGCTCAGACCAATCACTACCCAGCGCTGGCTCCTCCCACTCGGCATTCGATGCAGCTTCTTCACAGAGTGAAACTAACAGAGTTCAGACAGACGGAGCCGACTCACCGGACACTAACGGGAACGGTCGACAGACACTACTGACAGACACAAACGCAGATGTGACGATGATGTCATCAGATGTGacgatgatgtcatcaggagGGACGGAGACGGTGACAGGTCTTCACATCGACCTCACAGCTTCGGGACGCGGACATGATGTCACAGAGTCGTCCCCCATCTTCCTCTACACGGACAcaggtGTGTTCTCCCACACAGATCtggttaccatggcaacagacTCCACAGGGACAGACACGGCAGCCGATCCAACAGGAAGTCCTCTCGACCTCAgtcgTCCAGCTGTGACcgatcacacacagacagctgGTCCAGTCACTGAACAATACAACCCATCTGGTCAGGGTCCTGAAGTATGTGAGATTAAGACCTGTTTTGGGGCCCCCGACTCACAGTTCAAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186972 True 2475 lncRNA 0.42 3 35273779 35276853
TU186974 False 2228 lncRNA 0.42 2 35273779 35290255
XM_039819645.1 False 1250 mRNA 0.56 24 35240295 35274767

Neighbor

gene id symbol gene type direction distance location
LOC120571393 NA coding upstream 25983 35197333 ~ 35214312 (+)
si:ch211-133n4.6 NA coding upstream 62936 35161800 ~ 35177359 (+)
rfx5 rfx5 coding upstream 209758 35020790 ~ 35030537 (+)
psmb4 psmb4 coding upstream 220113 35013313 ~ 35020182 (+)
LOC120571430 NA coding upstream 275015 34964583 ~ 34965280 (+)
LOC120571418 NA coding downstream 27323 35317578 ~ 35327015 (+)
LOC120571423 fam63a coding downstream 42657 35332912 ~ 35336421 (+)
LOC120570960 LOC106675582 coding downstream 50817 35341072 ~ 35341767 (+)
LOC120571395 NA coding downstream 157519 35447774 ~ 35467170 (+)
LOC120571399 NA coding downstream 167292 35457547 ~ 35459609 (+)
G138652 NA non-coding upstream 91754 35147627 ~ 35148541 (+)
G138646 NA non-coding upstream 111142 35128905 ~ 35129153 (+)
G138599 NA non-coding upstream 208506 35031014 ~ 35031789 (+)
G138586 NA non-coding upstream 233897 34956883 ~ 35006398 (+)
LOC120571431 NA non-coding upstream 352322 34884295 ~ 34887973 (+)
G138769 NA non-coding downstream 31670 35321925 ~ 35322254 (+)
G138670 NA non-coding downstream 36074 35326329 ~ 35389253 (+)
G138721 NA non-coding downstream 46878 35337133 ~ 35373572 (+)
G138770 NA non-coding downstream 49177 35339432 ~ 35349572 (+)
G138772 NA non-coding downstream 56777 35347032 ~ 35356478 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 666918 34540077 ~ 34573377 (+)
LOC120571618 NA other upstream 1061749 34163590 ~ 34178546 (+)
LOC120572047 NA other upstream 1267852 33755237 ~ 33972443 (+)
mllt11 NA other downstream 9032 35299287 ~ 35316864 (+)
LOC120570961 NA other downstream 81712 35371967 ~ 35377206 (+)
mindy1 fam63a other downstream 88584 35378839 ~ 35444328 (+)
LOC120571398 NA other downstream 113181 35403436 ~ 35517319 (+)
G138692 LOC106676976,LOC106675582 other downstream 149036 35439291 ~ 35497618 (+)

Expression


Co-expression Network