G138781


Basic Information

Item Value
gene id G138781
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35488607 ~ 35490914 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU187000
gtagctctggactctctctttagggacaggtagcactgaactctctctttagggacaagtagcactggactctctctttagggacaggtagctctgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagcactgaactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagctctggactctctctttagggacaggtagctctggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgaactctctttagggacaggtagctctgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggac
>TU187002
gtagctctggactctctctttagggacaggtagcactgaactctctctttagggacaagtagcactggactctctctttagggacaggtagctctgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagctctgtactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagctctggactctctctttagggacaggtagctctggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgaactctctctttagggacaggtagc
>TU187003
gtagctctggactctctctttagggacaggtagcactgaactctctctttagggacaagtagcactggactctctctttagggacaggtagctctgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagctctggactctctctttagggacaggtagcactggactctctttagggacaggtatcac
>TU187005
gtagctctggactctctctttagggacaggtagcactgaactctctctttagggacaagtagcactggactctctctttagggacaggtagctctgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagctctggactctctctttagggacaggtagcactggactctctctttagggacaggtagcactgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctctttagggacaggtagctctggactctctctttagggacaggtagctctggac
>TU187008
ggactctctctttaggaacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagcactggactctctctttagggacaggtagctctgtactctctctttagggacaggtagctctggactctctctttagggacaggtagcactggactctctctttagggacaggtagcactgaactctctctttagggacaggtagcactgaactctctctttagggacaggtagcactggactctctctttagggacaggtagcactggactctctttagggacaggtatcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187000 True 532 lncRNA 0.50 2 35488607 35490062
TU187002 False 411 lncRNA 0.50 3 35488607 35490341
TU187003 False 324 lncRNA 0.50 3 35488607 35490914
TU187005 False 476 lncRNA 0.51 2 35488607 35489399
TU187008 False 316 lncRNA 0.50 2 35489684 35490914

Neighbor

gene id symbol gene type direction distance location
LOC120571395 NA coding upstream 21437 35447774 ~ 35467170 (+)
LOC120571399 NA coding upstream 28998 35457547 ~ 35459609 (+)
LOC120570960 LOC106675582 coding upstream 146840 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 152186 35332912 ~ 35336421 (+)
LOC120571418 NA coding upstream 161592 35317578 ~ 35327015 (+)
LOC120571424 LOC106633724 coding downstream 24207 35515121 ~ 35515782 (+)
LOC120570967 LOC106675582 coding downstream 462941 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 465503 35956417 ~ 35958468 (+)
riok1 riok1 coding downstream 488979 35979893 ~ 36004234 (+)
LOC120570972 NA coding downstream 657607 36148521 ~ 36153226 (+)
G138728 NA non-coding upstream 20766 35460424 ~ 35467841 (+)
G138670 NA non-coding upstream 99354 35326329 ~ 35389253 (+)
G138748 LOC106676976 non-coding downstream 59855 35550769 ~ 36011779 (+)
G138719 NA non-coding downstream 67799 35558713 ~ 35566787 (+)
G138725 NA non-coding downstream 125746 35616660 ~ 35704687 (+)
G138795 NA non-coding downstream 143523 35634437 ~ 35635272 (+)
G138799 NA non-coding downstream 174181 35665095 ~ 35665716 (+)
mindy1 fam63a other upstream 44279 35378839 ~ 35444328 (+)
LOC120570961 NA other upstream 111401 35371967 ~ 35377206 (+)
mllt11 NA other upstream 171743 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 198352 35240295 ~ 35290255 (+)
LOC120571788 LOC103147980,LOC106964283,LOC107396830,LOC103369207 other upstream 915230 34540077 ~ 34573377 (+)
LOC120570962 LOC106676000,LOC106675582 other downstream 5963 35496877 ~ 35551155 (+)
LOC120570963 fam63a,LOC107589430 other downstream 28002 35518916 ~ 35614565 (+)
G138806 NA other downstream 215986 35706900 ~ 35724402 (+)
LOC120571439 LOC106675582 other downstream 312390 35803304 ~ 35818966 (+)
LOC120571445 LOC106675582,LOC106676976 other downstream 519073 36009987 ~ 36104537 (+)

Expression


Co-expression Network