G139185 (LOC104948352)


Basic Information

Item Value
gene id G139185
gene name LOC104948352
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 36809209 ~ 36837240 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU187661
CCTGAGTACAGAGTGAAataccaaacacaaatacaatcaAATGAAAATAAGAAAGACAGCAATATGCACGCATAACTGGAAAATATGTCTAAAAGTATTTCATACAAATAAGTTAAGAATGTAAAAACCCATTTATAAAACAACTGGGGGCCCTATTTCAACGATCTGAgcgcacggtgtgaagcgcctggtgcaggtgcgtttagggcgtgtccaaatccactttggCTAGTTTTTACGGCAGAGAAAAGGgtccgtgtgccgggcgcctggttctaaagggttgtccttagtgtcttcattaatcagaggtgtgttttgggcgtattCCCccctaacaacaaaaaaacacatgccggttcgacgcacacaccagctcACAAGTATAAACACCAGGCCACttaacgtaggctacggcgaaagctctgcgtggagcctctgcAGAACCATAAAAAAGCAGttaggcttttccggtgttacatCGAAATCTGTGACCGGTCAGAATGGACTTGGTCGGCATTACCGGGAACGGCCACTGAAACCTCATTTCCGTTTCTTGCCGTTGGGGAAAACAAACCATTCTAATTGATGAGCGTGGACCTTGTTAGCGGTTAATCTTTAATCTGTGTCATATTTACGATAGTTTGTTTTGGTTTGGTACAATGCTGAAAAGTAGCTGTGTGGCATTCTGCGcccaaataatataaaaaaaaaaatcctgatcttaagtaataatactaataacgTTGCTGCTACGGTCCAAACTGTAACAGTTACATGGAGTTTATTCATGTAACAGGCTAAGACATACTGGTCTTTAATGTCCTAGCTTTAATGAACGTGGACTAACAAGAGACTGTTTGATGACCCTGGGATAACGTTACTGATAATACAGTCAGATATAGACAGACATAGATTTTCCACGGTAAAACAGAACGAAGTCCGGATCGCCCGTCAGCGATCCTCGGAAACTTGTCTCTTCACAGGCAGTGAGAACAAGTTCAGTCGACTTGAGAAAAACTTTGTTTTCCAATAGTCCACTTTGTCCGGAAAATGGAACAATTTAGCACAAACGTTTGGCGTGCATCCTTGTAGCAACTCGCATCGCAGCGGAAGACTAGGGAGGGGGAAGTGACGGGAAGTTTTATATTCCGGCCACCGAACATGGACTCACGCTGCATTCAGGTTCTGCTTAGCCAATGGAAATTCAGGACTTCCTGCTTCCTTGGCCATTTTGAGACTCCCTTCCCTCGTGGTAACGTGTACTTTTGCATGGAGGTGTGAAATTTAGGCTGCAACAATTACAACAGGCCTGATTCCTTTGTTCCAGAGGGCGTTCAGGCTCCACAGTTGCCTGTAGGCTGCATGGTTGAGATCTCTGTttaatactctgcttctgactggctacctaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctacagtaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctaggtactgtcagtgctcaccctcatactctgcttctgattggctacctaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctagctactgccagggcacgccctcatactctgcttctgactggctagtagtccttacctagctactgccagggcacgccctcatactctgcttctgactggctagtagtccttaactagctactgagcatatGCGACTCCGAACAAAGATGGaagagaagtgagatgtctcacactgtagctaaaacagagagctcaacacacagggtgaaaagaggactCAACCCTGAAAGCCACAGGAACTTAGTTTGGCGAGAAAGATATGATTAACTTCTTGGAAAGCTTTTGATGAATACAGAAACATTCCTTCTGTGTATTCACGGTTATATAGGGCAGATGTAATCCTATCAATAAGTTGTAAAATAGTCAAAAAAATCTATGTGgctctccttccaatcagcactatcatcagtctcaggatcagaagagtctccagtctggtcttcagtctctggttgtaaaagtggatgtgagttcctggctggttctggtcctccacagtcctctccatcagcttctgtttccatgtgttgagtttgtatctgatgaagctgtgaggactgagcttcctcttcatcatctttactcttcacagggacaggagtgaatgggaatttggtgatatcagcctcctccagcccttgaagctgctctccctcctgactgctccacatttcctcctgttcctctttaatgtgtggggggggctctggctcctgctggtccacactggagctacactcctgctgctcagggggaacctcttctttatCAACCAACAGCTGCTGCACATC
>TU187662
tgaCAGAAAGAGACCTTTTtattgttaatcacaattatATCAGAGACAATTATATGTAGAGAACCATGTTGAAGTGTTCCAGTACAATGTGTTGGATGTGTGTAGTAGTTTCTGTGTTGGTGGGCCATAGTCGTTGCATGTTGAGCCCAGTAGAGGGCAGCACATACCAATATATTATAGCAGGCTGAGgtaatgatagatagatagatagatagatagatagatagatagatagatagatagatagataggccCGAAATCCCTCACAAAGAACACCCATAACTTCTGTCTCCCTGTCAACAACTCCACCCTGTCTCCATCCCCACACATCCGTAACCAGGGAGTCATCTTCGACAGCAACCTCACTTTTGAAAACCACATCAACCAAATAACCAGAACTGCCTTCTTTCACCTCAAAAACATTGCCCGTCTCCGCCCATCACTCCCCTTCTTTGATTCACGCCTTCATCACTTCCAGAATTGACTAATGCAACAGCATCGTCTATGGTTCACCTGCAAAAGCCTTAAATAAACTCCAATACATCCAAAACAGAGCTTTCACCAttgcagccccctccctctggacctccctacccatacacatccgtgactgtactgacctggacacattcaaaacacacctcttcagattagctttcactgtttttaattgcttctAATGTGCTTGTTTTATgggttggttttattgcttatctgtttttaatgtgatatacagtatgtactggttttactgtaaagtgtctgagtaccatgaaaagtgctatataaaatgtattattattaaaattataataataataataataataataataataataataataatagatagactcccaaattgggaaatttcaGTCCTACAGCaagaaaatatcagacacacaggacacatacagaatatacatgaaataataaataggataaaatacaagaacaaatattcaCTCACTCATTACTCAAACtcagcttctgactggctagtagtccttacctagctactgccagggcacgccctcatactctgcttctgactggctagtagtccttacctagctactgccagggcacgccctcatactctgcttctgactggctagtagtccttaactagctactgagcatatGCGACTCCGAACAAAGATGGaagagaagtgagatgtctcacactgtagctaaaacagagagctcaacacacagggtgaaaagaggactCAACCCTGAAAGCCACAGGAACTTAGTTTGGCGAGAAAGATATGATTAACTTCTTGGAAAGCTTTTGATGAATACAGAAACATTCCTTCTGTGTATTCACGGTTATATAGGGCAGATGTAATCCTATCAATAAGTTGTAAAATAGTCAAAAAAATCTATGTGgctctccttccaatcagcactatcatcagtctcaggatcagaagagtctccagtctggtcttcagtctctggttgtaaaagtggatgtgagttcctggctggttctggtcctccacagtcctctccatcagcttctgtttccatgtgttgagtttgtatctgatgaagctgtgaggactgagcttcctcttcatcatctttactcttcacagggacaggagtgaatgggaatttggtgatatcagcctcctccagcccttgaagctgctctccctcctgactgctccacatttcctcctgttcctctttaatgtgtggggggggctctggctcctgctggtccacactggagctacactcctgctgctcagggggaacctcttctttatCAACCAACAGCTGCTGCACATC

Function

NR:

description
PREDICTED: zinc finger protein 184-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187661 True 2429 lncRNA 0.46 3 36809209 36837240
TU187662 False 1809 lncRNA 0.42 3 36834679 36837240

Neighbor

gene id symbol gene type direction distance location
LOC120571063 NA coding upstream 47274 36748017 ~ 36761935 (+)
LOC120571052 NA coding upstream 48308 36758305 ~ 36760901 (+)
LOC120571067 NA coding upstream 77971 36729393 ~ 36731238 (+)
LOC120571059 NA coding upstream 150025 36657374 ~ 36659184 (+)
LOC120570975 LOC103373434,LOC108250522 coding upstream 203386 36558860 ~ 36605823 (+)
LOC120571057 NA coding downstream 125363 36962603 ~ 36984154 (+)
LOC120571060 NA coding downstream 167367 37004607 ~ 37006882 (+)
LOC120570977 NA coding downstream 219554 37056794 ~ 37061670 (+)
LOC120570978 NA coding downstream 237445 37074685 ~ 37096687 (+)
LOC120571050 NA coding downstream 257186 37094426 ~ 37095869 (+)
LOC120571092 NA non-coding upstream 80130 36724886 ~ 36729079 (+)
G139189 NA non-coding upstream 129407 36679133 ~ 36679802 (+)
G139166 NA non-coding upstream 145288 36661407 ~ 36663921 (+)
G139171 NA non-coding upstream 175822 36632785 ~ 36633387 (+)
G138894 NA non-coding upstream 211347 36596667 ~ 36597862 (+)
LOC120571079 NA non-coding downstream 85495 36922735 ~ 36931556 (+)
LOC120571091 NA non-coding downstream 101032 36938272 ~ 36942471 (+)
G139257 NA non-coding downstream 192080 37029320 ~ 37029792 (+)
LOC120571088 NA non-coding downstream 308734 37145974 ~ 37151893 (+)
G139286 NA non-coding downstream 355624 37192864 ~ 37193419 (+)
LOC120571613 NA other upstream 276674 36526529 ~ 36532535 (+)
G138668 NA other upstream 292627 36512606 ~ 36516582 (+)
G138883 NA other upstream 303275 36493103 ~ 36505934 (+)
gabpb2a gabpb2,LOC102789669 other upstream 455107 36338396 ~ 36354102 (+)
G138693 NA other upstream 562125 36229330 ~ 36247084 (+)
LOC120571069 NA other downstream 150713 36987953 ~ 36989697 (+)
G139139 NA other downstream 209761 37047001 ~ 37056722 (+)
G139152 LOC104963332,LOC104942256,LOC104953734,LOC104948352 other downstream 230518 37067758 ~ 37116471 (+)
G139141 NA other downstream 280146 37117386 ~ 37375707 (+)
LOC120571062 NA other downstream 563052 37400292 ~ 37422427 (+)

Expression


Co-expression Network