G139326


Basic Information

Item Value
gene id G139326
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 37554751 ~ 37555980 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU187826
cggctcgttgagattcgcccgttttcagaggcagtttcaaatagtgagatttgctgagaaaagaggtgtcaatgggatttagaggttctatgtatgtcctagttacccactaaactgtcattattcaactatgacaaggtaaaatcagttttgcattctatcacccctttgtTGAAAGTTGAAAGTTTGCTTGAActataaaagcagttgaaagttaCAGGACGTTTCTTTCTTAtgaggaatatatatatatgaatagggctgggcattgtttggattttaacCGAGCCAGCTTTGGTCCTTAACTACCGCTCAACAGCACCCGAAACCCAGGGTGGCCGAATTAAGGCGTGCCCTGCAGCAGCGTACAATTGCTTTtaagccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcaaagttCTACTGACGAATAACtcaaagtttgtttgttttttcacatttttattcgCTTGCATTCCTGTCGGCTTATTGTTGTTCACTGAAAGAATATCAAAGTTCTACTGACAAATAACTCAACGTTTGTATTCACTGTATATTCCAGTCTGcttattacaaaacaaaatgtttatatttatgttcGTATAAGATGGAGTTTATATGAATTACTCAACATTTCCAGTTCATTCTCGTTAATTCCcatgaatgtttccaaaatcccCCAGCTTATTTTTCCATCTAAAGTTTCCGGTCAGTTTCCGCCCCTTTGCAACCCTATACAGAATATACCTTTGGATGAG
>TU187827
tgtgtgtcaaagttCTACTGACGAATAACtcaaagtttgtttgttttttcacatttttattcgCTTGCATTCCTGTCGGCTTATTGTTGTTCACTGAAAGAATATCAAAGTTCTACTGACAAATAACTCAACGTTTGTATTCACTGTATATTCCAGTCTGcttattacaaaacaaaatgtttatatttatgttcGTATAAGATGGAGTTTATATGAATTACTCAACATTTCCAGTTCATTCTCGTTAATTCCcatgaatgtttccaaaatcccCCAGCTTATTTTTCCATCTAAAGTTTCCGGTCAGTTTCCGCCCCTTTGCAACCCTATACAGAATATACCTTTGGATGAG
>TU187828
tgtgtgtcaaagttCTACTGACGAATAACtcaaagtttgtttgttttttcacatttttattcgCTTGCATTCCTGTCGGCTTATTGTTGTTCACTGAAAGAATATCAAAGTTCTACTGACAAATAACTCAACGTTTGTATTCACTGTATATTCCAGTCTGcttattacaaaacaaaatgtttatatttatgttcGTATAAGATGGAGTTTATATGAATTACTCAACATTTCCAGTTCATTCTCGTTAATTCCcatgaatgtttccaaaatcccCCAGCTTATTTTTCCATCTAAAGTTTCCGGTCAGTTTCCGCCCCTTTGCAACCCTATACAGAATATACCTTTGGATGAGAATGTAAATGTGTTGTGAATATCATTATTGAAATATATTATGAGAGTTATCCTGTGTCACGTCT
>TU187829
ctccgacacacagtcggacaaaatttgcaattagacataaattttcgtaaaacggcccatatttgacctctacatagttgatttctcgcataaaaaagtctcagaagtgaatttaatggtaaaatagcagatgaacaatgtatacaatttctgagatctgcacgacctagattcagaagactaactgatctcaggtcagttgtgtagccgatgtaaatgttggggcgtgacaaagagagactagagccaaatgaggaggagccgcaatagttgacgtcaactaggcggctcgttgagattcgcccgttttcagaggcagtttcaaatagtgagatttgctgagaaaagaggtgtcaatgggatttagaggttctatgtatgtcctagttacccactaaactgtcattattcaactatgacaaggtaaaatcagttttgcattctatcacccctttgtTGAAAGTTGAAAGTTTGCTTGAActataaaagcagttgaaagttaCAGGACGTTTCTTTCTTAtgaggaatatatatatatgaatagggctgggcattgtttggattttaacCGAGCCAGCTTTGGTCCTTAACTACCGCTCAACAGCACCCGAAACCCAGGGTGGCCGAATTAAGGCGTGCCCTGCAGCAGCGTACAATTGCTTTtaagccgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU187826 True 881 lncRNA 0.40 1 37555036 37555916
TU187827 False 352 lncRNA 0.34 1 37555565 37555916
TU187828 False 416 lncRNA 0.33 1 37555565 37555980
TU187829 False 691 lncRNA 0.42 1 37554751 37555441

Neighbor

gene id symbol gene type direction distance location
LOC120570990 NA coding upstream 2853 37527705 ~ 37551898 (+)
LOC120571065 NA coding upstream 46055 37507022 ~ 37508696 (+)
LOC120570988 NA coding upstream 62208 37478550 ~ 37492543 (+)
LOC120570987 NA coding upstream 78160 37458588 ~ 37476591 (+)
LOC120571071 NA coding upstream 117393 37436256 ~ 37437358 (+)
LOC120570991 NA coding downstream 57141 37613121 ~ 37616487 (+)
LOC120571056 NA coding downstream 782457 38338437 ~ 38340755 (+)
LOC120571002 NA coding downstream 882692 38438672 ~ 38440490 (+)
LOC120571053 NA coding downstream 907029 38463009 ~ 38465285 (+)
LOC120571058 NA coding downstream 1017841 38573821 ~ 38593537 (+)
G139165 NA non-coding upstream 251 37553491 ~ 37554500 (+)
G139140 NA non-coding upstream 11698 37542239 ~ 37543053 (+)
G139307 NA non-coding upstream 105496 37446714 ~ 37449255 (+)
G139308 NA non-coding upstream 139552 37414348 ~ 37415199 (+)
G139303 NA non-coding upstream 206357 37346709 ~ 37348394 (+)
LOC120571095 NA non-coding downstream 832 37556812 ~ 37565069 (+)
G139327 NA non-coding downstream 3527 37559507 ~ 37559854 (+)
G139339 NA non-coding downstream 52646 37608626 ~ 37612267 (+)
G139590 LOC104948352 non-coding downstream 107086 37663066 ~ 37737720 (+)
G139636 NA non-coding downstream 249368 37805348 ~ 37824100 (+)
LOC120570989 NA other upstream 31619 37497634 ~ 37523132 (+)
G139164 NA other upstream 108167 37443392 ~ 37446584 (+)
LOC120571062 NA other upstream 132324 37400292 ~ 37422427 (+)
G139141 NA other upstream 179044 37117386 ~ 37375707 (+)
G139152 LOC104963332,LOC104942256,LOC104953734,LOC104948352 other upstream 438280 37067758 ~ 37116471 (+)
G139586 LOC104948352 other downstream 130558 37686538 ~ 38256966 (+)
G139581 NA other downstream 870770 38426750 ~ 38430454 (+)
G139594 NA other downstream 1037595 38593575 ~ 38594662 (+)
LOC120571012 cct3,LOC102778987,LOC105012686 other downstream 1380766 38936746 ~ 38957569 (+)
G139838 NA other downstream 1416730 38972710 ~ 38999473 (+)

Expression


Co-expression Network