G139845 (LOC108246181)


Basic Information

Item Value
gene id G139845
gene name LOC108246181
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 39012238 ~ 39015904 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU188621
cttttattctgaaaatataaaaaatattctatttttattctgttaaatttaattgttttaaatattaaaaaaacctgtctctctgacctgtccgTGTGTCTGACCTGtttgtctctctaacctgtctgtggatctgacctgtctgtctctctgacctgtctgtctctctgtgtttaccTCTGTCTTTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCTCCCCCAgtgtgtctctctaacctgtctgtctctctctgacctgtctgtgggtctgacctgtctgtctctctgacctgtctgtctctctgtgtttaccTCTGTCTCTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCtcccccagcctgtctctctaacctgtctgtctctctctaacctgtctgtgggtctgacctgtctgtgggtctgacctgtctgtctctctgtgtttaccTCTGTCTCTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCTCCCCCAgtgtgtctctctaacctgtctgtctctctctgacctgtctgtgggtctgacctgtctgtctctctgacctgtctgtctctctgtgtttaccTCTGTCTCTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCTCTCCCAAcatgtctctctaacctgtctgtctctctctaacctgtctgtgggtctgacctgtctgtgggtctgacctgtctgtctctctgtgtttaccTCTGTCTCTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCTCTCCCAAcatgtctctctaacctgtctgtctctctctaacctgtctgtgggtctgacctgtctgtgggtctgacctgtctgtctctctgtgtttaccTCTGTCTCTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCTCCCCCAGcgtgtctctctaacctgtctgtctctctctgacctgtctgtgggtctgacctgtctgtctctctgacctgtctgtctctctgtgtttaccTCTGTCTCTTGCGTGGCTGGTTGTTGTTCTTGATCAGCTGGGCCTTGATGTGCTCCCCCAGCGTGTCATCATGTTTTGATGCCCAGTGTCTCAGGATGCTGGTGGTGAACTGGTCGTCATGGTGACAGGGCCGACTCAGCACCATCTTCACCATCTCCTCACTGGGcctgggcagagagagagagacaggtaaccagagagacagacaggtaaccagagagacagacaggtaagcagagagagagagacaggcacacacagagagagacaggtacagagagagagagacaggtaaccagagagaaagacaggcacacagatagagagagacaggcacaaagagagaacagacagacacacagacaggcaggcagatagacagaTTAACAGGAGTGTGtaacctgtgtgtctctgaatgTGTGAATGGGTTAGGGTAGTTCagggtgaatgtgtgaatgggtCAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCAGGGTGAATGGGTTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtTAGGGTAGTTCagggtgaatgtgtgaatgggtCAGGGTAGTTCagggtgaatgtgtgaatgggtTAGAGCAGTGATTCTTAACCATAGGGCCGCGGCCCAAACTTGGGCCACCAGCGCCCCCTAGAGGGCCGCAAAAAACCTTCAGTTTTGCACCTGTGGGCCGCGGGACTGCGTGCAGCTTTCGACCAtgtggtggcggtaatgcatcACTCGGTTGTTTAAAAAGCGCCAATACACAGAGAAGAAGACTGTCTACTTCGCAGCAAAAATGGATacgtttttaaaaagaaaaaatgaagacGAACGTCCTGCCGATACCCCCACCCAGAAGACAAAGTTTTTGCGGAAATACAATCTCGACTTCATTAAATACGGTTTCGTAAATGGAGGAACAGAGGCAGTGCCAAAAGCCCAGTGTGTGGAGTGTGGGCTAATGCTGTCCAACGAAGCTCTCAAGCCCTCAAAACTACAGCGGCATCTAGAGACCAAGCACCCGATGCTCGTGGGAAAGCCGGTGGAATATTTTAAGAGGAAGGAAATTGGGCTGCAGATGCAGAAAAGGTCTGTCGTGTCACTGACAAACAACTCTAAATGTGCATTGAAAGCCAGCTACCTCGTAGCCAGACGTGTGGCACAGAGTAAGAAAGCATTCACCACAGCGGAGGAGTTGGTTCTGCCTGCCGCTGTTGATATGTGCCGTGAGCTAATCGGAGAGGCCGCTGCAAAAAAGCTGCTGACCATCCCACTCTCAAACGACACTGTGAGTCACCGTATCGCAGACATGGCCTTAGACATACAGCATCAACTTACAGAAAGAATAAAAAGtagcccttttttttctttgcaattaGACGAGTCCACGGATGTCACGAATGCTGCACTGCTGCTAGTTTTTGTTCGCTATCGCTGGGACAGTAGTTTGCACGAAGACATACTGTTTTGTGGAGAGCTACCAACACGAACTACGGCTCAGGAATGTTTCCGCTGCATGGATAACTACTTCAGTGAGAACGGCCTGGACTGGCAGAACTGTGTTGGGGTGTGCAGTGATGGTGCAGCATCAATGACTGGCAGGCATCATGGTGTCATTAGACAGATACTTGATCATGCGCCAGAAGCTAAATGGACACACTGTTTTCTCCACCGTGAAAGCCTTGCAGCAAAACAGATGTCACCAGATCTCCACCAGGTGATGGATGTAAGTGTGAAAACCATAAACTTTATTAAAAGCAATGCTGTGAACTCCAGATGTTTTGCTAAGCTTTGTGAGGACATAGAAGCAGATCATGTCCAGCTGCTATATCACAGTGAAGTGAGATGGCTCTCAAGAGGACTGGTCCTCAATCGTTTGTTTGAACTGAGGAATGAGGTGTTCTCTTTTCTCACTGAGAAAAAATCTCATCTTGCACATTACTATGCTGACACAATGTTCACAGCAAAACTTGCCTACCTCTGTGACATTTTTTCACTACTGAACCAACTGAACACCTCACTTCAAGGAAGAAACAGCAACATATTTTGTGTTGCAGACAAAGTTGAAGCTTTC

Function

NR:

description
PREDICTED: SCAN domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188621 True 3436 TUCP 0.48 2 39012238 39015904

Neighbor

gene id symbol gene type direction distance location
LOC120571006 NA coding upstream 305908 38697721 ~ 38706330 (+)
LOC120571005 LOC104963332,LOC104953734 coding upstream 314683 38690978 ~ 38697555 (+)
LOC120571004 NA coding upstream 344294 38644958 ~ 38667944 (+)
LOC120571068 NA coding upstream 380225 38630789 ~ 38632013 (+)
LOC120571044 NA coding upstream 397357 38612597 ~ 38614881 (+)
LOC120571016 NA coding downstream 37295 39053199 ~ 39121788 (+)
LOC120571448 NA coding downstream 60812 39076716 ~ 39082222 (+)
LOC120571450 NA coding downstream 175681 39191585 ~ 39192174 (+)
G139843 NA non-coding upstream 3626 38995070 ~ 39008612 (+)
G139839 NA non-coding upstream 26224 38979041 ~ 38986014 (+)
G139825 NA non-coding upstream 85307 38926703 ~ 38926931 (+)
G139596 LOC104963332,LOC104948352,LOC104953734,LOC104942256 non-coding upstream 93685 38808850 ~ 38918553 (+)
G139803 NA non-coding upstream 107965 38774315 ~ 38904273 (+)
G139854 NA non-coding downstream 27963 39043867 ~ 39064485 (+)
LOC120571451 NA non-coding downstream 50180 39066084 ~ 39068090 (+)
G139864 NA non-coding downstream 80030 39095934 ~ 39104580 (+)
G139833 NA non-coding downstream 106213 39122117 ~ 39126190 (+)
G139865 NA non-coding downstream 109543 39125447 ~ 39180619 (+)
G139838 NA other upstream 12765 38972710 ~ 38999473 (+)
LOC120571012 cct3,LOC102778987,LOC105012686 other upstream 54669 38936746 ~ 38957569 (+)
G139594 NA other upstream 417576 38593575 ~ 38594662 (+)
G139581 NA other upstream 581784 38426750 ~ 38430454 (+)
G139586 LOC104948352 other upstream 755272 37686538 ~ 38256966 (+)
G139856 LOC108250349,LOC108249964 other downstream 38867 39054771 ~ 39208169 (+)
LOC120571018 NA other downstream 164931 39180835 ~ 39184528 (+)
LOC120571019 NA other downstream 192055 39207959 ~ 39213480 (+)

Expression


Co-expression Network