LOC120570967 (LOC106675582)


Basic Information

Item Value
gene id LOC120570967
gene name LOC106675582
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35953855 ~ 35955159 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819652.1
TCTGTGATCATATTTCCTTGTTCCCTCCCCTTCAGAGCTACAGTTTGCAGATGGGTGTAACCAACATGCTGGGGCAAGTACAACTGCGTATCACATGCTTTTATTACATCACAGCTGAGACTAGTCTCACTTCTCAGGAAGTGAGACAcaagacagtcagacagtcgtcactgagcgagaggtgaaatggcgcagaaaggagttgagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtgacaATTAactgtggacacagctactgcatgaactgtattaaaagtCACTGGGATGAAGAGGATTGTAAGTACATCTACAGCTGCCCTGAGTGCAGGAAGACgttcacaccgaggcctgtACTGGTGAAAAGCACCATGTTGGCAGctttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcaccgGGAGAAAACTCAAAGCCATCAAATCCTGCCTGGTTTGTCTGATCTCTTATTGTGAGAAACACCTTCAGCCTCATTTTGAATCTCCTGCTTTtgagaaacacaagctggtggagccgtccaagaagctccaggagaacgtctgctctcgtcatgatgaggtgatgatCTCCCGTCTACCTATCCGAACTCATTCATCCGTACACCCTGCCCAGAAGCCTAAGATCACACGACCAGGTTCTGCTGGTAGCCCCTCGTGCCAGACtacagcagagagaaaagagCGCGGGACCTCGTCTGTGGAACTCCCTGCCTTTAGAGATTAG

Function

NR:

description
tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819652.1 True 828 mRNA 0.50 2 35953855 35955159

Neighbor

gene id symbol gene type direction distance location
LOC120571424 LOC106633724 coding upstream 438073 35515121 ~ 35515782 (+)
LOC120571395 NA coding upstream 486685 35447774 ~ 35467170 (+)
LOC120571399 NA coding upstream 494246 35457547 ~ 35459609 (+)
LOC120570960 LOC106675582 coding upstream 612088 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 617434 35332912 ~ 35336421 (+)
LOC120571435 NA coding downstream 1258 35956417 ~ 35958468 (+)
riok1 riok1 coding downstream 24734 35979893 ~ 36004234 (+)
LOC120570972 NA coding downstream 193362 36148521 ~ 36153226 (+)
LOC120571441 NA coding downstream 240191 36195350 ~ 36256121 (+)
LOC120570973 NA coding downstream 319754 36274913 ~ 36277816 (+)
LOC120571440 fam63a non-coding upstream 14505 35780811 ~ 35939350 (+)
G138680 NA non-coding upstream 20019 35837179 ~ 35933836 (+)
G138813 NA non-coding upstream 111246 35824676 ~ 35842609 (+)
G138726 LOC101480093 non-coding upstream 116715 35808155 ~ 35837140 (+)
G138712 NA non-coding upstream 129668 35748511 ~ 35824187 (+)
G138819 NA non-coding downstream 5174 35960333 ~ 35996309 (+)
G138821 NA non-coding downstream 13435 35968594 ~ 35968983 (+)
G138817 NA non-coding downstream 16678 35971837 ~ 35998150 (+)
G138729 NA non-coding downstream 35703 35990862 ~ 35994537 (+)
G138824 NA non-coding downstream 47757 36002916 ~ 36003576 (+)
LOC120571439 LOC106675582 other upstream 134889 35803304 ~ 35818966 (+)
G138806 NA other upstream 229453 35706900 ~ 35724402 (+)
LOC120570963 fam63a,LOC107589430 other upstream 339290 35518916 ~ 35614565 (+)
LOC120570962 LOC106676000,LOC106675582 other upstream 402700 35496877 ~ 35551155 (+)
LOC120571398 NA other upstream 436536 35403436 ~ 35517319 (+)
LOC120571445 LOC106675582,LOC106676976 other downstream 54828 36009987 ~ 36104537 (+)
G138676 NA other downstream 110212 36065371 ~ 36257319 (+)
LOC120571442 LOC106675582,LOC106676446 other downstream 151558 36106717 ~ 36215827 (+)
G138711 LOC106675582,LOC106676000 other downstream 182988 36138147 ~ 36215671 (+)
G138693 NA other downstream 274171 36229330 ~ 36247084 (+)

Expression


Co-expression Network