LOC120570980


Basic Information

Item Value
gene id LOC120570980
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 37152032 ~ 37187178 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819664.1
atgaaAACAGAAGGTAATTGTGACGTTCTGAACGAGAGCGGAGAACCTCCGTCAGGTTTGAGAAGTCATcagctgttggtggttaaagaagaggttccccctgagcagcaggagtgtagctccagtgtggatcagcaggagccagagccccccccacacattaaagaggaacaggaggaactgtggagcagtcaggagggagagcagcttcaagggctggaggaggctgatatcaccaagttcccattcactcctgtccctgtgaagagtgaagatgacgaagaggaagctcagtcctcacagcttcatcaacgacaaactcaacacatggaaacagaagctgatggagaggactgtggaggaccagaaccagccaggaactcccATCCatttttacaaccagagactgaagaccagactggagactcttctgatcccgagactgatgacagtgctgattggaaggagaccagagaacctcagtcagttttaaactctctgaaacatgattcagcATCTTTTACTGATAGCGGAAccctgaagagacacatgagaatccacacaggagagaagccttttagctgctcagtttgtaataaatcttttacaCTGAGTGAACATTTACAGtcacacatgagaactcacacaggagaaaaacctttcagctgctcagtctgtaagaaatcttttacacataGTGGAAGTTTACGGatacacatgagaatccacacaggagagaagccttttagctgctctgaaTGTGGTAAAGCTTTCACTGATAGTGGAACCCTGAAGAAACACACgataactcacacagatgttgagcagctgttggtggttaaagaagaggttccccctgagcagcaggagtgtagctccagtgtggaccagcaggagccagagccctcCCCAGAcgttaaagaggaacaggaggaactgtggagcagtcaggagggagagcagcttcaagggctggaggaggctgatatcaccaagttcccattcactcctgtccctgtgaagagtgaagatgatgaagagaaagctcagtcctcacagcttcatcagagacaaactcagCACATGGAAACagcagctgatggagaggactctgatggagaggactgtggaggaccagaaccagtcaggaactcacatccactattacaaccagagactgaagaccagactggagactcttctgatcctgagactgaagacagtgctgattggaaggagaccagagaacctcagtcagctttaaactctctgaaacatgattcaagatgtaagaaaacattcagctgctctgagtgtgggaggAGATTTGGGACCAAGCAACAGCTGAAGAGTCACATGAGAACTcatacaggagaaaaacctttcagctgctctgagtgtgggaaaagatttggcCAGAGGGCAgatctgaagagacacatgataactcatacaggagaaaaacctttcagctgctctaagtgtgggaaaagatttggcCACAGGGCAgatctgaagagacacatgataactcacacaggagagaaacttttcagctgctcagtctgtaagaactCTTTTACACATAGtggaagtttaaaaaaacacatgagaatccacacaggagaaaaatatttaagctgctctgagtgtggtaaaGCTTTCATTGATAGTGGAAAACTGAAGACACACATGttaactcacacaggagaaaagccTTTTAGTTGTTCagtttgtaagaaatcttttacacagagaggaaatttacggtcacacatgagaatccacacaggagaaaaacctttcagctgctcagtttgtaagaaatcttttacacataGTGGagatttacagaaacacatgagaacccacagaggagagaaacctttcagctgctctgagtgtggtaaaGCTTTCACTGAAAGTGGAACCCTGAAGATACACATGTTAACGCACACAGGAGAAAAGCCTTTTAGTTGTTCagtttgtaagaaatcttttacacagagaggaaatttacggtcacacatgagaactcacacaggagaaaaacctttcagatgctcagtttgtaagaaatcttttacacaaaGTGATCATTTACGGTCACACATTAGCTATCACACGGGAGAAAGaagattcagctgcagtgtttgtaacaaaagatttgtgtggcgttctgatgtcaaaacacataaatgtgttggtcagatggaaacagaagctgatggagaggactgtggaggaccagaaccagtcaggaactcacatccacttttacaaccaaagactgaagaccagactggagactcttctgaacatGAGACTGGTGACATGGAATAACGTTTGTGCCTTCAAGTCCAAgtaaaacttctcaagtatcaaacaaaaatcttGGGCCCAATATTTTATAGGGCCCACACATATATTCACTTCTTTCTAAGATTCAAGATTGCAAGATTCACTATTAATCATGTATCAATATGGGAGTTTATTCAATACACATTGGgttcatgttttaattttgtgtaTCATGTTTAAGCACAATTTAGGCCCAGCAGTCTCTGAGAGGagacttttctctctctgtgtcagggagacaggaagtgcagGTTGAAAGCTATCTTTAGTTTAAACAAGGGAGATGTGATGGAGGTAGCATAGGGAAGTTAGCCTAGCAAGGTGTTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819664.1 True 2691 mRNA 0.44 5 37152032 37187178

Neighbor

gene id symbol gene type direction distance location
LOC120570979 NA coding upstream 10954 37136857 ~ 37141078 (+)
LOC120570978 NA coding upstream 55345 37074685 ~ 37096687 (+)
LOC120571050 NA coding upstream 56163 37094426 ~ 37095869 (+)
LOC120570977 NA coding upstream 90362 37056794 ~ 37061670 (+)
LOC120571060 NA coding upstream 145150 37004607 ~ 37006882 (+)
LOC120571061 NA coding downstream 20534 37207712 ~ 37225453 (+)
LOC120571054 NA coding downstream 72093 37259271 ~ 37260428 (+)
LOC120570982 NA coding downstream 92543 37279721 ~ 37280734 (+)
LOC120570984 NA coding downstream 140401 37327579 ~ 37330460 (+)
LOC120571051 NA coding downstream 188614 37375792 ~ 37378767 (+)
LOC120571088 NA non-coding upstream 139 37145974 ~ 37151893 (+)
G139257 NA non-coding upstream 122240 37029320 ~ 37029792 (+)
LOC120571091 NA non-coding upstream 209561 36938272 ~ 36942471 (+)
LOC120571079 NA non-coding upstream 220476 36922735 ~ 36931556 (+)
G139210 LOC104948352 non-coding upstream 301098 36773184 ~ 36850934 (+)
G139286 NA non-coding downstream 5686 37192864 ~ 37193419 (+)
LOC120571093 NA non-coding downstream 24718 37211896 ~ 37219933 (+)
LOC120571082 NA non-coding downstream 41667 37228845 ~ 37249621 (+)
G139292 NA non-coding downstream 65851 37253029 ~ 37253563 (+)
G139160 NA non-coding downstream 118988 37306166 ~ 37383972 (+)
G139152 LOC104963332,LOC104942256,LOC104953734,LOC104948352 other upstream 35561 37067758 ~ 37116471 (+)
G139139 NA other upstream 95310 37047001 ~ 37056722 (+)
LOC120571069 NA other upstream 162335 36987953 ~ 36989697 (+)
LOC120571613 NA other upstream 619497 36526529 ~ 36532535 (+)
G138668 NA other upstream 635450 36512606 ~ 36516582 (+)
LOC120571062 NA other downstream 213114 37400292 ~ 37422427 (+)
G139164 NA other downstream 256214 37443392 ~ 37446584 (+)
LOC120570989 NA other downstream 310456 37497634 ~ 37523132 (+)
G139586 LOC104948352 other downstream 499360 37686538 ~ 38256966 (+)
G139581 NA other downstream 1239572 38426750 ~ 38430454 (+)

Expression


Co-expression Network