LOC120571006


Basic Information

Item Value
gene id LOC120571006
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 38697721 ~ 38706330 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819691.1
atgaagatccacacaggagagaagccatttAGCTGCTCggagtgtgggaaaagatttgTCTTCAAGTCATATCTGAAAAAACACATGatgactcacacaggagaaaaaccttttagctgctctgagtgtcaGAGGAAATTTGGCCGCAAGTCCAATCTGGAATATCACAtgataactcacacaggagaaaaacctttcagctgctctgagtgtcaGAGGAAATTTAGCTTGAAGTCAGATCTTAAGAGACACATGAggatccacacaggagaaaaacagttcagctgctctgagtgtcaGAGGAAATTTGGCTGCAAcagagaacctcagtcagctttaaactctctgaaacatgattcaagatgtaagaaaacattcagctgctctgagtgtgggaaaatATTTAGCTTCAAGTCAAATCTGAAGCAACACAtgataactcacacaggagaaaaaccttttagctgctcagtttgtaagaaaAGATTTGGCCTCAACTCAATTCTTAAAAAACACATGTTAACTCATAGAGGAGAGAAACGTTTCAGTTGCTCACGTTGTGATAAAAGATTTGGCAACGGGTATAATCTGAagaaacacatgagaactcatACAGGAGAAAAGCTTTTCAGCTGCTCGGTCTGTAAAAAATCTTTTTCAGAGAATGGAAGTTTaaagaaacacatgagaatccacacaggagagaagccttttAGCTGTTCTGACTGTGGTAAAGCTTTCAGTGTTAGCGAATACCTGAAgacacacatgagaactcatacaggagaaaaacctttcagctgctcagtctgtgaGAAATCTTTTTCACACAGTGGAGCATTAAAGTCACACATGGcggtccacacaggagaaaaaccttttagctgctcagtttgtaaaaaATCATTTACACAGAGCGTATATTTAAAGGCACACATGAGAagccacacaggagagaaacctttcagctgctctgagtgtgataAACGATTTGGCCAGAAGGAAcatctgaagagacacatgataactcacacaggagaaaaaccttttagctgctcgCTTTGTGATAAAAGATTTGGAAATGATTATAATCTGAAGACCCACATGATAACTCATACAGGAGACAAACCTTTCAGTTGCTCAGTTTGTGATAAAAGATTTGGCGTCCGGTCAATGCTTAAAAAACACATGTTAACTCATACATGGGAAAAACCTcagctcagtctgtaagaaatattttacacagaAAGAAAATTATAGAAACACATAAGAACTCATACGGGAGAGAAAAGATATAGCTGCCCAGTGTGAGTGTTGAAAGATTTATATAGAAGACACAACTGACACGCCACATGGCAGTAGAGTTTACATTCTCTGCCCGAGCTCAAACTTGACGATATTTTTCACCGCTATCCTCGGGCAGGGcagggccgggccgggccgggcccttgatcaagcatttgtgttttcttaatcattactttattagcctaattgggtggggcgaaagctatgcctctccagcttctcccgtagctctgggtgtatgtcctgcactgactttAGTGGGAGGTAAACTGTGCCTCCCCCTCTGCAGCACTGTTGTCGACCAGTGCGTCGGCATGCAGACCGTGGCGAAGGACGGTATTAATTAGGTGATCGAGACAAGAAAGTCTCGTAtatggttccagggctttgattatgttgctgCCTTGATCTGTTCCCCACACTATTCAGCTGAGGGAACTAGGgtcgagtttttttttttttaacgtttctTCATTCtgatccatttgcgatccattccattctgaataaacaaactgCAGTTTAGCCTGCTTTGTCCTTGTTgtattattcattaagataattctaaacagatttctgtagttcaaacaactctgaattatagttgagaacgtcagtgaTAACGGCCCATGTATTAAAAAATTGTtgggtttaaatcgggctcaggctcataattacagttaatgtgtcgggctgggctcggacacaacgtgcacaggCTCGGGTTGgttcgggcttgatttttttgggCCTGATCCAAGCTCTACATGGCAGTTCACACAGTAGAGAGAAAATACACATGCAGTGTTTGTGATAAAAGATTTGCCCATAGTACTATGTCATAAAACATGAATGTGTCAGTtgtcacagcttcatcagactGAGGAGAAGAGAGGCAGAGCCTCCAGCCAGCAgagaaactcaacacatggaaacataagctgatggagaggactgtggcggaccagaaccagccaagAACTCCCATCCAAAttcacttttacaaccagagactgaagaccagactggagactcttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819691.1 True 2347 mRNA 0.42 2 38697721 38706330

Neighbor

gene id symbol gene type direction distance location
LOC120571005 LOC104963332,LOC104953734 coding upstream 166 38690978 ~ 38697555 (+)
LOC120571004 NA coding upstream 29777 38644958 ~ 38667944 (+)
LOC120571068 NA coding upstream 65708 38630789 ~ 38632013 (+)
LOC120571044 NA coding upstream 82840 38612597 ~ 38614881 (+)
LOC120571058 NA coding upstream 104184 38573821 ~ 38593537 (+)
LOC120571016 NA coding downstream 346869 39053199 ~ 39121788 (+)
LOC120571448 NA coding downstream 370386 39076716 ~ 39082222 (+)
LOC120571450 NA coding downstream 485255 39191585 ~ 39192174 (+)
G139777 NA non-coding upstream 112112 38584615 ~ 38585609 (+)
LOC120571090 NA non-coding upstream 190708 38492940 ~ 38507013 (+)
LOC120571099 NA non-coding upstream 279314 38417967 ~ 38418407 (+)
LOC120571098 NA non-coding upstream 279795 38404304 ~ 38417926 (+)
LOC120571083 NA non-coding upstream 302253 38392745 ~ 38395468 (+)
G139793 LOC104963332,LOC104942256,LOC104953734,LOC104948352 non-coding downstream 34242 38740572 ~ 38743766 (+)
G139803 NA non-coding downstream 67985 38774315 ~ 38904273 (+)
G139596 LOC104963332,LOC104948352,LOC104953734,LOC104942256 non-coding downstream 102520 38808850 ~ 38918553 (+)
G139611 LOC104948352 non-coding downstream 149896 38856226 ~ 38858241 (+)
G139825 NA non-coding downstream 220373 38926703 ~ 38926931 (+)
G139594 NA other upstream 103059 38593575 ~ 38594662 (+)
G139581 NA other upstream 267267 38426750 ~ 38430454 (+)
G139586 LOC104948352 other upstream 440755 37686538 ~ 38256966 (+)
LOC120570989 NA other upstream 1174589 37497634 ~ 37523132 (+)
G139164 NA other upstream 1251137 37443392 ~ 37446584 (+)
LOC120571012 cct3,LOC102778987,LOC105012686 other downstream 230416 38936746 ~ 38957569 (+)
G139838 NA other downstream 266380 38972710 ~ 38999473 (+)
G139845 LOC108246181 other downstream 305908 39012238 ~ 39015904 (+)
G139856 LOC108250349,LOC108249964 other downstream 348441 39054771 ~ 39208169 (+)
LOC120571018 NA other downstream 474505 39180835 ~ 39184528 (+)

Expression


Co-expression Network