LOC120571044


Basic Information

Item Value
gene id LOC120571044
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 38612597 ~ 38614881 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819744.1
cagagaacctcagtcagctttaaactctctgaaacaggATTCAAGAcgtaagaaaacattcagctgctctgagtgtgggaggAGATTTGGCTTCAAGTACAGTCTGAAgacacacatgagaactcacacaggagagaaacctttcagctgctctgttTGTAAGAAATCATTTACACAGAGAGGAGATTTACAGAAACatatgagaatccacacaggagaaaaaccttttagctgctctgagtgtggtaaaGGATTTGGCCGCAAAGAACATCTGAAGACACACATGATGaatcacagaggagagagaccTTTTAATTGCTCAGTTTGTGAGGAATCTTTTACCCGGGGTGAACGTTTAAAGatacacatgagaatccacacaggagagaagcctttcAACTGCTCCGAGTGTGACAAAAGGTTTAGAAAAAGCCAAGATCTGAAGAGACACATTAAGTCTCACACAGAAGCAAAAGCTTTCAGCTGCTCCGAGTGCGGGAAGAGATTTACCCAAAACTCAAATCTGAAaacacacatgagaatccacgcGGGAGACAAACGATTCAGCTGTTCCCTTTGTGGGAAAAGATTTATACAGAAGGGACAATTGGCGTACCACATGAAACATCACACAGGGGAGACGCCTTTTACTTCCTGTGTCAGTGACGCAACAACGCAGCCGGAGGCGCCAagcattaaagaggaacaggaggaactgtgcaCCAATCAGGAGGGAGACCCGGACACTGAtaacagtgctgattggaaggagacaaAAGACTcccagtcagctttaaactctctgaaacatgttgAGCGTAATACGGACAAATCATCTCGTTCCGTCAGTCGCTGCTCTGAGTGCGGGAAACAATTTAGACAGAAATCTAATCTGAAGAatcacatgagaatccacaagGGGGACaagcctttcagctgctccGTTTGTGGTAAAAGATTTATACAGAACGCGCACATGACATACCACATGACACGGCACACGGGAGAGAAAATGTTCTGCTGCGGCGTTTGTGACAAACGATTTATTTGGCCGTATCAGCTCAGGaaacataaatgtgttggtcgGACGGAAACGGAAGCAGCCAGGAACTCCCATCCAGCGACGATCTCACAACCAGAGACTGGAGATAAAGCCGGACGGTCTATCGTAGCGGAGATCGAAGTCAGTTGTGACGACTGGGAGGAGACCGGAGAGCCTGATTGGACGTGCAACGCTGCTGAGAAACAGTTCAGCTGCTCCGAGTGCGGGAAAAGATTTAACCGCAAGACTCACCTGAAGAGACATGCGATGACTCACACGGGAGAGAGACCGTTTAGCTGCTCGGTGTGTCGGAGGTCTTTCACGGAGAGCGGGAacttacacaaacacatggcCGTGCACACGGGAGAGAAACGCTTCAGCTGTGGGTTTTGCAAGCGAAGATTCACCTGGCACTCTCAGCTCCAAACTCACGAGTGTGATCGTCCTCAGTCGGCACGGCAGCGCCGCCAGAGACGAACCAAACCGAGAcgagctgatggagaggaccgCGGTCCATCCAAACCCGCCAGGAGACGACTTCTGTTGCCCCGCCCGAGCGCCGATGACCTGGTAGCAACCAGTCCGCCAAACCACACGACGATAACGTTTGTTTGTTCCCCCCCTCTAATCCAAgccacaggagcgtttcatatGTTAGCGCCCTAGCGGTGGCAGGAGATACGTCCTCgaatctaaaccagagaaggtaactGTCGAGGTTTTAAACCTGTTCACTCAGCTAAAAAAAACGGATTCTTAAAATAGATCTTTATAGAAAAAAGGTCCAAGGCACTCAGCAAGCTGCCCAGTTCTATTTGCTTTTTAATGTACTAAGATTTCGACATGAAATAACCGTTTAAGtatttttccattttaaataaaggcttttttcttttgtaaatttGCAAGAAGAGTGCCTTTGGCCATGCGCACATCGCGATGTAGACGATGAAACacaatattgtgcagccctagtatacaagttaaaatataagatatatgaataaaatataagTGACTTCCGTGAATACAACTAAGGGGGTTTTCCGTCTAGGTTTAGCTCCTCGCCTCGGTACTGTGTTCTAAGGCctgctgcacactggctgcgtggcgtgagcggccttgtctgtacacatggatgttttccataaacataaatatatactgatctgattacgtCAGTTCAGTATATATAGgctttatttacagtaaaataggctacagaatttccttctggattaac

Function

GO: NA

KEGG:

id description
K09191 GTF3A; general transcription factor IIIA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819744.1 True 2285 mRNA 0.46 1 38612597 38614881

Neighbor

gene id symbol gene type direction distance location
LOC120571058 NA coding upstream 19060 38573821 ~ 38593537 (+)
LOC120571053 NA coding upstream 147312 38463009 ~ 38465285 (+)
LOC120571002 NA coding upstream 172107 38438672 ~ 38440490 (+)
LOC120571056 NA coding upstream 271842 38338437 ~ 38340755 (+)
LOC120570991 NA coding upstream 996110 37613121 ~ 37616487 (+)
LOC120571068 NA coding downstream 15908 38630789 ~ 38632013 (+)
LOC120571004 NA coding downstream 30077 38644958 ~ 38667944 (+)
LOC120571005 LOC104963332,LOC104953734 coding downstream 76097 38690978 ~ 38697555 (+)
LOC120571006 NA coding downstream 82840 38697721 ~ 38706330 (+)
LOC120571016 NA coding downstream 438318 39053199 ~ 39121788 (+)
G139777 NA non-coding upstream 26988 38584615 ~ 38585609 (+)
LOC120571090 NA non-coding upstream 105584 38492940 ~ 38507013 (+)
LOC120571099 NA non-coding upstream 194190 38417967 ~ 38418407 (+)
LOC120571098 NA non-coding upstream 194671 38404304 ~ 38417926 (+)
LOC120571083 NA non-coding upstream 217129 38392745 ~ 38395468 (+)
G139793 LOC104963332,LOC104942256,LOC104953734,LOC104948352 non-coding downstream 125691 38740572 ~ 38743766 (+)
G139803 NA non-coding downstream 159434 38774315 ~ 38904273 (+)
G139596 LOC104963332,LOC104948352,LOC104953734,LOC104942256 non-coding downstream 193969 38808850 ~ 38918553 (+)
G139611 LOC104948352 non-coding downstream 241345 38856226 ~ 38858241 (+)
G139825 NA non-coding downstream 311822 38926703 ~ 38926931 (+)
G139594 NA other upstream 17935 38593575 ~ 38594662 (+)
G139581 NA other upstream 182143 38426750 ~ 38430454 (+)
G139586 LOC104948352 other upstream 355631 37686538 ~ 38256966 (+)
LOC120570989 NA other upstream 1089465 37497634 ~ 37523132 (+)
G139164 NA other upstream 1166013 37443392 ~ 37446584 (+)
LOC120571012 cct3,LOC102778987,LOC105012686 other downstream 321865 38936746 ~ 38957569 (+)
G139838 NA other downstream 357829 38972710 ~ 38999473 (+)
G139845 LOC108246181 other downstream 397357 39012238 ~ 39015904 (+)
G139856 LOC108250349,LOC108249964 other downstream 439890 39054771 ~ 39208169 (+)
LOC120571018 NA other downstream 565954 39180835 ~ 39184528 (+)

Expression


Co-expression Network